Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A1O00337 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A1O00337 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A1O00337 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.51□□□□□ -0.09
SLC28A1O00337 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A1O00337 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
SLC28A1O00337 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.51□□□□□ -0.09
SLC28A1O00337 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A1O00337 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A1O00337 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A1O00337 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A1O00337 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A1O00337 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A1O00337 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A1O00337 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SLC28A1O00337 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SLC28A1O00337 KRT8P14-201ENST00000414254 1442 ntBASIC14.5□□□□□ -0.09
SLC28A1O00337 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SLC28A1O00337 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SLC28A1O00337 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SLC28A1O00337 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SLC28A1O00337 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SLC28A1O00337 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SLC28A1O00337 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SLC28A1O00337 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SLC28A1O00337 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.5□□□□□ -0.09
SLC28A1O00337 INTS4P2-202ENST00000614726 2019 ntBASIC14.5□□□□□ -0.09
SLC28A1O00337 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SLC28A1O00337 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SLC28A1O00337 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SLC28A1O00337 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
SLC28A1O00337 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.5□□□□□ -0.09
SLC28A1O00337 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SLC28A1O00337 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SLC28A1O00337 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.5□□□□□ -0.09
SLC28A1O00337 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.5□□□□□ -0.09
SLC28A1O00337 AC104596.2-201ENST00000512793 793 ntBASIC14.5□□□□□ -0.09
SLC28A1O00337 AC022616.1-201ENST00000518688 554 ntBASIC14.5□□□□□ -0.09
SLC28A1O00337 AC120045.2-201ENST00000567334 178 ntBASIC14.5□□□□□ -0.09
SLC28A1O00337 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.5□□□□□ -0.09
SLC28A1O00337 AC093512.1-201ENST00000617969 520 ntBASIC14.5□□□□□ -0.09
SLC28A1O00337 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.5□□□□□ -0.09
SLC28A1O00337 AL603764.1-201ENST00000636452 321 ntBASIC14.5□□□□□ -0.09
SLC28A1O00337 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SLC28A1O00337 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SLC28A1O00337 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SLC28A1O00337 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SLC28A1O00337 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.5□□□□□ -0.09
SLC28A1O00337 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
SLC28A1O00337 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.5□□□□□ -0.09
SLC28A1O00337 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.5□□□□□ -0.09
SLC28A1O00337 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.5□□□□□ -0.09
SLC28A1O00337 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SLC28A1O00337 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.5□□□□□ -0.09
SLC28A1O00337 AC136759.1-202ENST00000530858 2194 ntBASIC14.5□□□□□ -0.09
SLC28A1O00337 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SLC28A1O00337 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.5□□□□□ -0.09
SLC28A1O00337 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SLC28A1O00337 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.5□□□□□ -0.09
SLC28A1O00337 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SLC28A1O00337 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SLC28A1O00337 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.5□□□□□ -0.09
SLC28A1O00337 AGGF1P1-201ENST00000509500 2073 ntBASIC14.5□□□□□ -0.09
SLC28A1O00337 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.5□□□□□ -0.09
SLC28A1O00337 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SLC28A1O00337 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SLC28A1O00337 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SLC28A1O00337 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SLC28A1O00337 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SLC28A1O00337 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.49□□□□□ -0.09
SLC28A1O00337 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SLC28A1O00337 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SLC28A1O00337 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.49□□□□□ -0.09
SLC28A1O00337 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SLC28A1O00337 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.49□□□□□ -0.09
SLC28A1O00337 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
SLC28A1O00337 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.49□□□□□ -0.09
SLC28A1O00337 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.49□□□□□ -0.09
SLC28A1O00337 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.49□□□□□ -0.09
SLC28A1O00337 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.49□□□□□ -0.09
SLC28A1O00337 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.49□□□□□ -0.09
SLC28A1O00337 AC114812.1-204ENST00000449669 728 ntBASIC14.49□□□□□ -0.09
SLC28A1O00337 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.49□□□□□ -0.09
SLC28A1O00337 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.49□□□□□ -0.09
SLC28A1O00337 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SLC28A1O00337 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.49□□□□□ -0.09
SLC28A1O00337 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SLC28A1O00337 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.49□□□□□ -0.09
SLC28A1O00337 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.49□□□□□ -0.09
SLC28A1O00337 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SLC28A1O00337 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.49□□□□□ -0.09
SLC28A1O00337 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.49□□□□□ -0.09
SLC28A1O00337 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SLC28A1O00337 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.49□□□□□ -0.09
SLC28A1O00337 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.49□□□□□ -0.09
SLC28A1O00337 AC004790.1-201ENST00000612686 536 ntBASIC14.49□□□□□ -0.09
SLC28A1O00337 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SLC28A1O00337 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.49□□□□□ -0.09
SLC28A1O00337 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.49□□□□□ -0.09
SLC28A1O00337 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms