Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 RN7SL560P-201ENST00000577943 264 ntBASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 AL358472.3-201ENST00000608147 415 ntBASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 AC002472.3-201ENST00000640124 621 ntBASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 REXO1L6P-201ENST00000603433 1515 ntBASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
YJEFN3A6XGL0 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 AL355994.2-201ENST00000447882 704 ntBASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 HIST2H2BB-201ENST00000449108 381 ntBASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 GCOM2-201ENST00000509133 1104 ntBASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 TUBB1P2-201ENST00000422712 1306 ntBASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 TUBB1P1-201ENST00000503144 1300 ntBASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.6■□□□□ 0.09
YJEFN3A6XGL0 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.59■□□□□ 0.09
YJEFN3A6XGL0 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
YJEFN3A6XGL0 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
YJEFN3A6XGL0 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
YJEFN3A6XGL0 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.59■□□□□ 0.09
YJEFN3A6XGL0 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
YJEFN3A6XGL0 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
YJEFN3A6XGL0 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
YJEFN3A6XGL0 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.59■□□□□ 0.09
YJEFN3A6XGL0 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.59■□□□□ 0.09
YJEFN3A6XGL0 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
YJEFN3A6XGL0 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
YJEFN3A6XGL0 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms