Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 GHSR-202ENST00000427970 912 ntBASIC15.64■□□□□ 0.09
SRRM3A6NNA2 AL353705.2-201ENST00000428243 662 ntBASIC15.64■□□□□ 0.09
SRRM3A6NNA2 KRT43P-201ENST00000434019 910 ntBASIC15.64■□□□□ 0.09
SRRM3A6NNA2 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 AC018529.2-202ENST00000611482 3087 ntBASIC15.64■□□□□ 0.09
SRRM3A6NNA2 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.64■□□□□ 0.09
SRRM3A6NNA2 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 AC105233.2-201ENST00000523697 349 ntBASIC15.63■□□□□ 0.09
SRRM3A6NNA2 AF228730.5-201ENST00000530288 346 ntBASIC15.63■□□□□ 0.09
SRRM3A6NNA2 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 AC015936.2-201ENST00000593177 259 ntBASIC15.63■□□□□ 0.09
SRRM3A6NNA2 AC106872.11-201ENST00000605838 421 ntBASIC15.63■□□□□ 0.09
SRRM3A6NNA2 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms