Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 IMP3P2-201ENST00000489760 475 ntBASIC13.07□□□□□ -0.32
MBD3L3A6NE82 AC006122.1-201ENST00000493323 440 ntBASIC13.07□□□□□ -0.32
MBD3L3A6NE82 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 RN7SL574P-201ENST00000581512 297 ntBASIC13.07□□□□□ -0.32
MBD3L3A6NE82 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 AC144522.1-201ENST00000625111 1658 ntBASIC13.07□□□□□ -0.32
MBD3L3A6NE82 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 AL590440.2-201ENST00000641973 1595 ntBASIC13.07□□□□□ -0.32
MBD3L3A6NE82 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 AC136759.1-202ENST00000530858 2194 ntBASIC13.06□□□□□ -0.32
MBD3L3A6NE82 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 AC012618.1-201ENST00000461223 412 ntBASIC13.06□□□□□ -0.32
MBD3L3A6NE82 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 NUP210P1-202ENST00000504322 710 ntBASIC13.06□□□□□ -0.32
MBD3L3A6NE82 AC090857.1-201ENST00000527400 390 ntBASIC13.06□□□□□ -0.32
MBD3L3A6NE82 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 RBM8B-201ENST00000555532 525 ntBASIC13.06□□□□□ -0.32
MBD3L3A6NE82 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 AC133540.1-201ENST00000620845 1019 ntBASIC13.06□□□□□ -0.32
MBD3L3A6NE82 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
MBD3L3A6NE82 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms