Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 BX842568.4-201ENST00000421222 227 ntBASIC16.41■□□□□ 0.22
CCDC66A2RUB6 KRT18P32-201ENST00000424695 1287 ntBASIC16.41■□□□□ 0.22
CCDC66A2RUB6 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 CEND1P1-201ENST00000451006 455 ntBASIC16.41■□□□□ 0.22
CCDC66A2RUB6 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC66A2RUB6 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 OS9-206ENST00000435406 2346 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 AC005829.1-201ENST00000570002 483 ntBASIC16.4■□□□□ 0.22
CCDC66A2RUB6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC66A2RUB6 AL118506.1-201ENST00000601296 3082 ntBASIC16.39■□□□□ 0.22
CCDC66A2RUB6 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 MST1P2-201ENST00000457982 2291 ntBASIC16.39■□□□□ 0.21
CCDC66A2RUB6 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms