Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM129A0AVI4 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM129A0AVI4 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM129A0AVI4 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM129A0AVI4 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.65□□□□□ -0.22
TMEM129A0AVI4 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM129A0AVI4 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM129A0AVI4 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
TMEM129A0AVI4 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM129A0AVI4 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.65□□□□□ -0.22
TMEM129A0AVI4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 SLED1-202ENST00000512051 380 ntBASIC13.64□□□□□ -0.23
TMEM129A0AVI4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 SPDYE22P-201ENST00000582158 798 ntBASIC13.64□□□□□ -0.23
TMEM129A0AVI4 SRD5A3P1-201ENST00000603021 949 ntBASIC13.64□□□□□ -0.23
TMEM129A0AVI4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 AL359183.1-201ENST00000623796 2132 ntBASIC13.64□□□□□ -0.23
TMEM129A0AVI4 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM129A0AVI4 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM129A0AVI4 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.63□□□□□ -0.23
TMEM129A0AVI4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM129A0AVI4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.63□□□□□ -0.23
TMEM129A0AVI4 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM129A0AVI4 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM129A0AVI4 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM129A0AVI4 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM129A0AVI4 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM129A0AVI4 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM129A0AVI4 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.63□□□□□ -0.23
TMEM129A0AVI4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM129A0AVI4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM129A0AVI4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM129A0AVI4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM129A0AVI4 SPDYE19P-201ENST00000338590 713 ntBASIC13.63□□□□□ -0.23
TMEM129A0AVI4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.63□□□□□ -0.23
TMEM129A0AVI4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM129A0AVI4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.63□□□□□ -0.23
TMEM129A0AVI4 AL589987.1-201ENST00000453380 819 ntBASIC13.63□□□□□ -0.23
TMEM129A0AVI4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.63□□□□□ -0.23
TMEM129A0AVI4 DOC2GP-202ENST00000514950 1163 ntBASIC13.63□□□□□ -0.23
TMEM129A0AVI4 AC022447.6-201ENST00000515522 438 ntBASIC13.63□□□□□ -0.23
TMEM129A0AVI4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.63□□□□□ -0.23
TMEM129A0AVI4 API5-211ENST00000534695 560 ntTSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms