Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PTCH2Q9Y6C5 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.71■□□□□ 0.27
PTCH2Q9Y6C5 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTCH2Q9Y6C5 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.71■□□□□ 0.27
PTCH2Q9Y6C5 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.71■□□□□ 0.27
PTCH2Q9Y6C5 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTCH2Q9Y6C5 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTCH2Q9Y6C5 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.71■□□□□ 0.27
PTCH2Q9Y6C5 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.71■□□□□ 0.27
PTCH2Q9Y6C5 AL357373.1-201ENST00000394974 322 ntBASIC16.71■□□□□ 0.27
PTCH2Q9Y6C5 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTCH2Q9Y6C5 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC16.71■□□□□ 0.27
PTCH2Q9Y6C5 PGAM1P12-201ENST00000505622 748 ntBASIC16.71■□□□□ 0.27
PTCH2Q9Y6C5 RPS23-204ENST00000507980 836 ntTSL 2 BASIC16.71■□□□□ 0.27
PTCH2Q9Y6C5 RNA5SP417-201ENST00000516459 108 ntBASIC16.71■□□□□ 0.27
PTCH2Q9Y6C5 AC012073.1-201ENST00000606114 1108 ntBASIC16.71■□□□□ 0.27
PTCH2Q9Y6C5 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.71■□□□□ 0.27
PTCH2Q9Y6C5 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PTCH2Q9Y6C5 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
PTCH2Q9Y6C5 AP003680.1-201ENST00000598970 3660 ntBASIC16.71■□□□□ 0.27
PTCH2Q9Y6C5 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTCH2Q9Y6C5 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTCH2Q9Y6C5 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTCH2Q9Y6C5 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTCH2Q9Y6C5 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PTCH2Q9Y6C5 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTCH2Q9Y6C5 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
PTCH2Q9Y6C5 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PTCH2Q9Y6C5 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PTCH2Q9Y6C5 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 MARK2P16-201ENST00000605714 1723 ntBASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 PEBP1P2-201ENST00000603980 558 ntBASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 AP000322.3-201ENST00000608665 388 ntBASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 AC010491.1-201ENST00000563101 2797 ntBASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCH2Q9Y6C5 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 KRT18P36-201ENST00000411618 1276 ntBASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 THY1-209ENST00000580275 578 ntTSL 3 BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 HMGB1P24-201ENST00000611897 328 ntBASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC16.69■□□□□ 0.26
PTCH2Q9Y6C5 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms