Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFT52Q9Y366 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFT52Q9Y366 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
IFT52Q9Y366 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFT52Q9Y366 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFT52Q9Y366 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.18□□□□□ -0.14
IFT52Q9Y366 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
IFT52Q9Y366 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.18□□□□□ -0.14
IFT52Q9Y366 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFT52Q9Y366 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
IFT52Q9Y366 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.18□□□□□ -0.14
IFT52Q9Y366 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.18□□□□□ -0.14
IFT52Q9Y366 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.18□□□□□ -0.14
IFT52Q9Y366 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
IFT52Q9Y366 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.18□□□□□ -0.14
IFT52Q9Y366 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.18□□□□□ -0.14
IFT52Q9Y366 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.18□□□□□ -0.14
IFT52Q9Y366 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
IFT52Q9Y366 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
IFT52Q9Y366 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.18□□□□□ -0.14
IFT52Q9Y366 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.18□□□□□ -0.14
IFT52Q9Y366 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
IFT52Q9Y366 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.18□□□□□ -0.14
IFT52Q9Y366 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
IFT52Q9Y366 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFT52Q9Y366 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFT52Q9Y366 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFT52Q9Y366 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFT52Q9Y366 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
IFT52Q9Y366 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.18□□□□□ -0.14
IFT52Q9Y366 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFT52Q9Y366 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFT52Q9Y366 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
IFT52Q9Y366 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
IFT52Q9Y366 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFT52Q9Y366 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
IFT52Q9Y366 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFT52Q9Y366 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFT52Q9Y366 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
IFT52Q9Y366 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.18□□□□□ -0.14
IFT52Q9Y366 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFT52Q9Y366 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IFT52Q9Y366 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IFT52Q9Y366 AC136759.1-202ENST00000530858 2194 ntBASIC14.17□□□□□ -0.14
IFT52Q9Y366 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
IFT52Q9Y366 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
IFT52Q9Y366 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
IFT52Q9Y366 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
IFT52Q9Y366 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
IFT52Q9Y366 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.17□□□□□ -0.14
IFT52Q9Y366 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.17□□□□□ -0.14
IFT52Q9Y366 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
IFT52Q9Y366 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
IFT52Q9Y366 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.17□□□□□ -0.14
IFT52Q9Y366 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.17□□□□□ -0.14
IFT52Q9Y366 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.17□□□□□ -0.14
IFT52Q9Y366 TSSK5P-201ENST00000423978 907 ntBASIC14.17□□□□□ -0.14
IFT52Q9Y366 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.17□□□□□ -0.14
IFT52Q9Y366 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.17□□□□□ -0.14
IFT52Q9Y366 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
IFT52Q9Y366 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.17□□□□□ -0.14
IFT52Q9Y366 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.17□□□□□ -0.14
IFT52Q9Y366 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
IFT52Q9Y366 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.17□□□□□ -0.14
IFT52Q9Y366 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
IFT52Q9Y366 AL158212.4-201ENST00000624062 1286 ntBASIC14.17□□□□□ -0.14
IFT52Q9Y366 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IFT52Q9Y366 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IFT52Q9Y366 INTS4P1-203ENST00000641008 3683 ntBASIC14.17□□□□□ -0.14
IFT52Q9Y366 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IFT52Q9Y366 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.17□□□□□ -0.14
IFT52Q9Y366 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IFT52Q9Y366 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IFT52Q9Y366 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.17□□□□□ -0.14
IFT52Q9Y366 HSPA7-201ENST00000445535 1927 ntBASIC14.17□□□□□ -0.14
IFT52Q9Y366 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IFT52Q9Y366 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.17□□□□□ -0.14
IFT52Q9Y366 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
IFT52Q9Y366 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
IFT52Q9Y366 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
IFT52Q9Y366 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.17□□□□□ -0.14
IFT52Q9Y366 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.17□□□□□ -0.14
IFT52Q9Y366 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
IFT52Q9Y366 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.17□□□□□ -0.14
IFT52Q9Y366 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.16□□□□□ -0.14
IFT52Q9Y366 KRT18P28-201ENST00000453838 1332 ntBASIC14.16□□□□□ -0.14
IFT52Q9Y366 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
IFT52Q9Y366 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
IFT52Q9Y366 Z82170.1-201ENST00000625081 3192 ntBASIC14.16□□□□□ -0.14
IFT52Q9Y366 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
IFT52Q9Y366 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
IFT52Q9Y366 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
IFT52Q9Y366 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
IFT52Q9Y366 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.16□□□□□ -0.14
IFT52Q9Y366 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
IFT52Q9Y366 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IFT52Q9Y366 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
IFT52Q9Y366 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
IFT52Q9Y366 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
IFT52Q9Y366 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms