Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 AL138799.1-201ENST00000448213 1675 ntBASIC14.25□□□□□ -0.13
VAPAQ9P0L0 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
VAPAQ9P0L0 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.24□□□□□ -0.13
VAPAQ9P0L0 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 AL645937.2-201ENST00000396808 931 ntBASIC14.24□□□□□ -0.13
VAPAQ9P0L0 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 AC097493.3-201ENST00000509725 367 ntBASIC14.24□□□□□ -0.13
VAPAQ9P0L0 SPDYE18-201ENST00000510091 1050 ntBASIC14.24□□□□□ -0.13
VAPAQ9P0L0 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 AC015911.4-201ENST00000588022 1070 ntBASIC14.24□□□□□ -0.13
VAPAQ9P0L0 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 AL365209.1-201ENST00000624418 6473 ntBASIC14.24□□□□□ -0.13
VAPAQ9P0L0 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAPAQ9P0L0 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 AC090505.1-201ENST00000430515 1834 ntBASIC14.23□□□□□ -0.13
VAPAQ9P0L0 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 AC026410.3-201ENST00000514280 936 ntBASIC14.23□□□□□ -0.13
VAPAQ9P0L0 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.23□□□□□ -0.13
VAPAQ9P0L0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms