Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KCMF1Q9P0J7 AC026748.1-201ENST00000624349 3251 ntBASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 AC112492.5-201ENST00000421897 457 ntBASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 AL355864.2-201ENST00000447420 863 ntBASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 BCRP2-202ENST00000447763 634 ntBASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 BCRP6-201ENST00000510112 632 ntBASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 BCRP7-201ENST00000511549 544 ntBASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 RAB43P1-201ENST00000561790 589 ntBASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 AC004466.1-201ENST00000599515 1080 ntBASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 CICP23-201ENST00000605013 2741 ntBASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
KCMF1Q9P0J7 MYO15B-237ENST00000642007 4893 ntBASIC14.27□□□□□ -0.12
KCMF1Q9P0J7 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KCMF1Q9P0J7 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
KCMF1Q9P0J7 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KCMF1Q9P0J7 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
KCMF1Q9P0J7 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
KCMF1Q9P0J7 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
KCMF1Q9P0J7 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
KCMF1Q9P0J7 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KCMF1Q9P0J7 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.27□□□□□ -0.12
KCMF1Q9P0J7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KCMF1Q9P0J7 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
KCMF1Q9P0J7 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KCMF1Q9P0J7 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
KCMF1Q9P0J7 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.27□□□□□ -0.12
KCMF1Q9P0J7 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
KCMF1Q9P0J7 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.27□□□□□ -0.12
KCMF1Q9P0J7 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
KCMF1Q9P0J7 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.27□□□□□ -0.12
KCMF1Q9P0J7 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 ARSEP1-201ENST00000420443 635 ntBASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 ATP5G2P4-201ENST00000442175 420 ntBASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 IGHV3-71-201ENST00000523324 359 ntBASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 AC025279.2-201ENST00000569730 653 ntBASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms