Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 AC009407.1-201ENST00000568958 598 ntBASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 INO80C-206ENST00000586489 594 ntTSL 3 BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
LIN7CQ9NUP9 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 FAM207CP-201ENST00000443486 507 ntBASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 AC135586.1-201ENST00000539323 574 ntBASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 TIMM17BP1-201ENST00000545713 516 ntBASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 AC008738.7-201ENST00000609744 511 ntBASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LIN7CQ9NUP9 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 HSPA7-201ENST00000445535 1927 ntBASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms