Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 AC006453.4-201ENST00000636949 1252 ntBASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
BLOC1S4Q9NUP1 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 SNX18-202ENST00000343017 3140 ntBASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 AC092135.3-201ENST00000624151 1846 ntBASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 CD8B2-202ENST00000417670 633 ntBASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 AC022447.6-201ENST00000515522 438 ntBASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 AP000812.2-201ENST00000538934 718 ntBASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 AP001002.3-201ENST00000623482 206 ntBASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 PDIA3P1-201ENST00000471856 1510 ntBASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 AL136172.1-201ENST00000598590 1394 ntBASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 AC005089.1-201ENST00000619486 2241 ntBASIC16.64■□□□□ 0.25
BLOC1S4Q9NUP1 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 ANKRD19P-201ENST00000338192 862 ntBASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 AC004945.1-201ENST00000416738 983 ntBASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 AC112492.5-201ENST00000421897 457 ntBASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 OR10B1P-201ENST00000601666 907 ntBASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 AL162274.1-201ENST00000617191 1098 ntBASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 AC138951.2-201ENST00000623455 1161 ntBASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms