Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 AL645937.2-201ENST00000396808 931 ntBASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 AC254562.1-201ENST00000417586 456 ntBASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 GAPDHP40-201ENST00000505218 1006 ntBASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 AC010327.4-202ENST00000591484 748 ntBASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 AL671883.3-201ENST00000603274 991 ntBASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 5S_rRNA.22-201ENST00000614916 106 ntBASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 AC073592.8-201ENST00000624126 511 ntBASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC10.4□□□□□ -0.75
CDC42SE2Q9NRR3 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
CDC42SE2Q9NRR3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
CDC42SE2Q9NRR3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC10.4□□□□□ -0.75
CDC42SE2Q9NRR3 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC10.4□□□□□ -0.75
CDC42SE2Q9NRR3 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
CDC42SE2Q9NRR3 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
CDC42SE2Q9NRR3 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
CDC42SE2Q9NRR3 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
CDC42SE2Q9NRR3 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.75
CDC42SE2Q9NRR3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 GOLGA8VP-201ENST00000559009 1798 ntBASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 AC087499.5-201ENST00000452760 1342 ntBASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 MST1P2-201ENST00000457982 2291 ntBASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 AC011474.4-201ENST00000623523 2076 ntBASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 HNRNPFP1-201ENST00000391730 1133 ntBASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 RPSAP43-201ENST00000402237 625 ntBASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 ZNF890P-202ENST00000530367 1156 ntBASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms