Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 GAPDHP40-201ENST00000505218 1006 ntBASIC16.82■□□□□ 0.28
CBX8Q9HC52 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.82■□□□□ 0.28
CBX8Q9HC52 KRT18P58-201ENST00000527480 1120 ntBASIC16.82■□□□□ 0.28
CBX8Q9HC52 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.82■□□□□ 0.28
CBX8Q9HC52 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX8Q9HC52 MTDHP5-201ENST00000598980 586 ntBASIC16.82■□□□□ 0.28
CBX8Q9HC52 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CBX8Q9HC52 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CBX8Q9HC52 AL109936.8-201ENST00000641772 604 ntBASIC16.82■□□□□ 0.28
CBX8Q9HC52 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CBX8Q9HC52 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX8Q9HC52 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC16.82■□□□□ 0.28
CBX8Q9HC52 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX8Q9HC52 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CBX8Q9HC52 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX8Q9HC52 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX8Q9HC52 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC16.82■□□□□ 0.28
CBX8Q9HC52 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.82■□□□□ 0.28
CBX8Q9HC52 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX8Q9HC52 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC16.82■□□□□ 0.28
CBX8Q9HC52 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC16.82■□□□□ 0.28
CBX8Q9HC52 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CBX8Q9HC52 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CBX8Q9HC52 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBX8Q9HC52 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CBX8Q9HC52 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CBX8Q9HC52 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBX8Q9HC52 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.81■□□□□ 0.28
CBX8Q9HC52 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC16.81■□□□□ 0.28
CBX8Q9HC52 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
CBX8Q9HC52 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBX8Q9HC52 AC015818.8-201ENST00000587907 1519 ntBASIC16.81■□□□□ 0.28
CBX8Q9HC52 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBX8Q9HC52 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBX8Q9HC52 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CBX8Q9HC52 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBX8Q9HC52 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBX8Q9HC52 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBX8Q9HC52 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.81■□□□□ 0.28
CBX8Q9HC52 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.81■□□□□ 0.28
CBX8Q9HC52 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.81■□□□□ 0.28
CBX8Q9HC52 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CBX8Q9HC52 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.81■□□□□ 0.28
CBX8Q9HC52 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC16.81■□□□□ 0.28
CBX8Q9HC52 RN7SL832P-201ENST00000607781 1756 ntBASIC16.81■□□□□ 0.28
CBX8Q9HC52 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CBX8Q9HC52 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBX8Q9HC52 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CBX8Q9HC52 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBX8Q9HC52 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBX8Q9HC52 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CBX8Q9HC52 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CBX8Q9HC52 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CBX8Q9HC52 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
CBX8Q9HC52 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBX8Q9HC52 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBX8Q9HC52 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CBX8Q9HC52 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CBX8Q9HC52 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CBX8Q9HC52 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CBX8Q9HC52 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CBX8Q9HC52 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CBX8Q9HC52 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CBX8Q9HC52 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
CBX8Q9HC52 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CBX8Q9HC52 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CBX8Q9HC52 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CBX8Q9HC52 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CBX8Q9HC52 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
CBX8Q9HC52 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CBX8Q9HC52 MIR574-201ENST00000385209 96 ntBASIC16.8■□□□□ 0.28
CBX8Q9HC52 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.8■□□□□ 0.28
CBX8Q9HC52 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.8■□□□□ 0.28
CBX8Q9HC52 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.8■□□□□ 0.28
CBX8Q9HC52 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.8■□□□□ 0.28
CBX8Q9HC52 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.8■□□□□ 0.28
CBX8Q9HC52 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.8■□□□□ 0.28
CBX8Q9HC52 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CBX8Q9HC52 AC010336.2-201ENST00000564226 506 ntBASIC16.8■□□□□ 0.28
CBX8Q9HC52 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
CBX8Q9HC52 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CBX8Q9HC52 AC009093.7-201ENST00000623853 1223 ntBASIC16.8■□□□□ 0.28
CBX8Q9HC52 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.8■□□□□ 0.28
CBX8Q9HC52 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CBX8Q9HC52 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CBX8Q9HC52 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CBX8Q9HC52 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.8■□□□□ 0.28
CBX8Q9HC52 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC16.8■□□□□ 0.28
CBX8Q9HC52 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC16.8■□□□□ 0.28
CBX8Q9HC52 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CBX8Q9HC52 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CBX8Q9HC52 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CBX8Q9HC52 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CBX8Q9HC52 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.79■□□□□ 0.28
CBX8Q9HC52 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CBX8Q9HC52 HADH-202ENST00000403312 1752 ntTSL 5 BASIC16.79■□□□□ 0.28
CBX8Q9HC52 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CBX8Q9HC52 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CBX8Q9HC52 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CBX8Q9HC52 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms