Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.39□□□□□ -0.11
BRF2Q9HAW0 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 SALL4P5-201ENST00000419001 1760 ntBASIC14.38□□□□□ -0.11
BRF2Q9HAW0 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.38□□□□□ -0.11
BRF2Q9HAW0 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
BRF2Q9HAW0 AC003102.2-201ENST00000589195 1469 ntBASIC14.38□□□□□ -0.11
BRF2Q9HAW0 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 AC097359.2-201ENST00000604992 2389 ntBASIC14.37□□□□□ -0.11
BRF2Q9HAW0 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 AC093433.1-201ENST00000458048 571 ntBASIC14.37□□□□□ -0.11
BRF2Q9HAW0 AC190387.1-201ENST00000551683 408 ntBASIC14.37□□□□□ -0.11
BRF2Q9HAW0 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 TP53TG3HP-202ENST00000569755 579 ntBASIC14.37□□□□□ -0.11
BRF2Q9HAW0 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.37□□□□□ -0.11
BRF2Q9HAW0 AL033527.5-201ENST00000641382 801 ntBASIC14.37□□□□□ -0.11
BRF2Q9HAW0 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 GRK6P1-201ENST00000400595 1711 ntBASIC14.37□□□□□ -0.11
BRF2Q9HAW0 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms