Protein–RNA interactions for Protein: Q99435

NELL2, Protein kinase C-binding protein NELL2, humanhuman

Predictions only

Length 816 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELL2Q99435 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELL2Q99435 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELL2Q99435 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELL2Q99435 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NELL2Q99435 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELL2Q99435 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
NELL2Q99435 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.22■□□□□ 0.03
NELL2Q99435 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NELL2Q99435 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELL2Q99435 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELL2Q99435 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELL2Q99435 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELL2Q99435 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELL2Q99435 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NELL2Q99435 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC15.22■□□□□ 0.03
NELL2Q99435 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELL2Q99435 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NELL2Q99435 VDAC1P1-201ENST00000439229 848 ntBASIC15.22■□□□□ 0.03
NELL2Q99435 AC073150.1-201ENST00000450406 1084 ntBASIC15.22■□□□□ 0.03
NELL2Q99435 AC130709.1-201ENST00000484779 1212 ntBASIC15.22■□□□□ 0.03
NELL2Q99435 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC15.22■□□□□ 0.03
NELL2Q99435 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.22■□□□□ 0.03
NELL2Q99435 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.22■□□□□ 0.03
NELL2Q99435 AC135983.4-201ENST00000564116 1262 ntBASIC15.22■□□□□ 0.03
NELL2Q99435 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.22■□□□□ 0.03
NELL2Q99435 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC15.22■□□□□ 0.03
NELL2Q99435 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NELL2Q99435 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELL2Q99435 AC138696.2-201ENST00000607376 223 ntBASIC15.22■□□□□ 0.03
NELL2Q99435 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
NELL2Q99435 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NELL2Q99435 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NELL2Q99435 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NELL2Q99435 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NELL2Q99435 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELL2Q99435 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NELL2Q99435 AC063926.3-201ENST00000624734 5658 ntBASIC15.22■□□□□ 0.03
NELL2Q99435 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELL2Q99435 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELL2Q99435 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.22■□□□□ 0.03
NELL2Q99435 AC092384.3-202ENST00000564646 2873 ntBASIC15.22■□□□□ 0.03
NELL2Q99435 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NELL2Q99435 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NELL2Q99435 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NELL2Q99435 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELL2Q99435 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.21■□□□□ 0.03
NELL2Q99435 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.21■□□□□ 0.03
NELL2Q99435 REXO1L5P-201ENST00000622260 2098 ntBASIC15.21■□□□□ 0.03
NELL2Q99435 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
NELL2Q99435 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.21■□□□□ 0.03
NELL2Q99435 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELL2Q99435 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
NELL2Q99435 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.21■□□□□ 0.03
NELL2Q99435 E2F3P2-201ENST00000447755 1422 ntBASIC15.21■□□□□ 0.03
NELL2Q99435 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.21■□□□□ 0.03
NELL2Q99435 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELL2Q99435 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELL2Q99435 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELL2Q99435 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NELL2Q99435 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NELL2Q99435 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NELL2Q99435 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC15.21■□□□□ 0.03
NELL2Q99435 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NELL2Q99435 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC15.21■□□□□ 0.03
NELL2Q99435 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NELL2Q99435 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC15.21■□□□□ 0.03
NELL2Q99435 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC15.21■□□□□ 0.03
NELL2Q99435 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC15.21■□□□□ 0.03
NELL2Q99435 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC15.21■□□□□ 0.03
NELL2Q99435 AC132192.2-201ENST00000596206 1147 ntBASIC15.21■□□□□ 0.03
NELL2Q99435 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.21■□□□□ 0.03
NELL2Q99435 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NELL2Q99435 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.21■□□□□ 0.03
NELL2Q99435 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELL2Q99435 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.21■□□□□ 0.03
NELL2Q99435 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
NELL2Q99435 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELL2Q99435 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELL2Q99435 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.21■□□□□ 0.02
NELL2Q99435 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NELL2Q99435 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
NELL2Q99435 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
NELL2Q99435 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NELL2Q99435 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NELL2Q99435 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NELL2Q99435 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NELL2Q99435 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NELL2Q99435 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NELL2Q99435 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NELL2Q99435 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELL2Q99435 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.2■□□□□ 0.02
NELL2Q99435 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.2■□□□□ 0.02
NELL2Q99435 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NELL2Q99435 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELL2Q99435 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELL2Q99435 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELL2Q99435 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELL2Q99435 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NELL2Q99435 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELL2Q99435 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms