Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLCC1Q96S66 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLCC1Q96S66 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLCC1Q96S66 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLCC1Q96S66 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLCC1Q96S66 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLCC1Q96S66 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLCC1Q96S66 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLCC1Q96S66 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLCC1Q96S66 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLCC1Q96S66 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.8□□□□□ -0.36
CLCC1Q96S66 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 AL353705.2-201ENST00000428243 662 ntBASIC12.8□□□□□ -0.36
CLCC1Q96S66 MTND6P24-201ENST00000440466 518 ntBASIC12.8□□□□□ -0.36
CLCC1Q96S66 AC023141.5-201ENST00000458585 616 ntBASIC12.8□□□□□ -0.36
CLCC1Q96S66 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLCC1Q96S66 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 AC026979.3-201ENST00000607315 403 ntBASIC12.8□□□□□ -0.36
CLCC1Q96S66 AC018529.1-201ENST00000613063 361 ntBASIC12.8□□□□□ -0.36
CLCC1Q96S66 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLCC1Q96S66 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLCC1Q96S66 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLCC1Q96S66 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLCC1Q96S66 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLCC1Q96S66 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLCC1Q96S66 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLCC1Q96S66 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLCC1Q96S66 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CLCC1Q96S66 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLCC1Q96S66 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.79□□□□□ -0.36
CLCC1Q96S66 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLCC1Q96S66 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLCC1Q96S66 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLCC1Q96S66 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLCC1Q96S66 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
CLCC1Q96S66 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CLCC1Q96S66 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.79□□□□□ -0.36
CLCC1Q96S66 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC12.79□□□□□ -0.36
CLCC1Q96S66 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CLCC1Q96S66 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.79□□□□□ -0.36
CLCC1Q96S66 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLCC1Q96S66 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLCC1Q96S66 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.79□□□□□ -0.36
CLCC1Q96S66 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.79□□□□□ -0.36
CLCC1Q96S66 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.79□□□□□ -0.36
CLCC1Q96S66 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.79□□□□□ -0.36
CLCC1Q96S66 AC254562.1-201ENST00000417586 456 ntBASIC12.79□□□□□ -0.36
CLCC1Q96S66 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC12.79□□□□□ -0.36
CLCC1Q96S66 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLCC1Q96S66 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.79□□□□□ -0.36
CLCC1Q96S66 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.79□□□□□ -0.36
CLCC1Q96S66 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLCC1Q96S66 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.79□□□□□ -0.36
CLCC1Q96S66 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.79□□□□□ -0.36
CLCC1Q96S66 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLCC1Q96S66 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLCC1Q96S66 AC026150.2-201ENST00000564693 1156 ntBASIC12.79□□□□□ -0.36
CLCC1Q96S66 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLCC1Q96S66 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
CLCC1Q96S66 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.79□□□□□ -0.36
CLCC1Q96S66 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLCC1Q96S66 MIR6080-201ENST00000617359 66 ntBASIC12.79□□□□□ -0.36
CLCC1Q96S66 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLCC1Q96S66 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.79□□□□□ -0.36
CLCC1Q96S66 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLCC1Q96S66 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CLCC1Q96S66 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLCC1Q96S66 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms