Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC091812.2-201ENST00000619081 385 ntBASIC12.27□□□□□ -0.45
RAB40CQ96S21 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.27□□□□□ -0.45
RAB40CQ96S21 AC084121.4-201ENST00000641598 221 ntBASIC12.27□□□□□ -0.45
RAB40CQ96S21 AF228730.8-201ENST00000642140 221 ntBASIC12.27□□□□□ -0.45
RAB40CQ96S21 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RAB40CQ96S21 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
RAB40CQ96S21 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB40CQ96S21 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.27□□□□□ -0.45
RAB40CQ96S21 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB40CQ96S21 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.27□□□□□ -0.45
RAB40CQ96S21 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB40CQ96S21 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RAB40CQ96S21 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.27□□□□□ -0.45
RAB40CQ96S21 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.27□□□□□ -0.45
RAB40CQ96S21 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.27□□□□□ -0.45
RAB40CQ96S21 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
RAB40CQ96S21 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.27□□□□□ -0.45
RAB40CQ96S21 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
RAB40CQ96S21 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB40CQ96S21 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB40CQ96S21 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
RAB40CQ96S21 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB40CQ96S21 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB40CQ96S21 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.27□□□□□ -0.45
RAB40CQ96S21 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB40CQ96S21 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.26□□□□□ -0.45
RAB40CQ96S21 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB40CQ96S21 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.26□□□□□ -0.45
RAB40CQ96S21 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.26□□□□□ -0.45
RAB40CQ96S21 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
RAB40CQ96S21 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.26□□□□□ -0.45
RAB40CQ96S21 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.26□□□□□ -0.45
RAB40CQ96S21 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB40CQ96S21 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.26□□□□□ -0.45
RAB40CQ96S21 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.26□□□□□ -0.45
RAB40CQ96S21 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB40CQ96S21 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB40CQ96S21 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB40CQ96S21 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB40CQ96S21 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.26□□□□□ -0.45
RAB40CQ96S21 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
RAB40CQ96S21 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB40CQ96S21 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.26□□□□□ -0.45
RAB40CQ96S21 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB40CQ96S21 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB40CQ96S21 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.26□□□□□ -0.45
RAB40CQ96S21 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
RAB40CQ96S21 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB40CQ96S21 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB40CQ96S21 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB40CQ96S21 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.26□□□□□ -0.45
RAB40CQ96S21 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB40CQ96S21 MCCD1P2-201ENST00000423228 335 ntBASIC12.26□□□□□ -0.45
RAB40CQ96S21 AC004832.2-201ENST00000426397 482 ntBASIC12.26□□□□□ -0.45
RAB40CQ96S21 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.26□□□□□ -0.45
RAB40CQ96S21 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.26□□□□□ -0.45
RAB40CQ96S21 TMEM198B-204ENST00000484016 896 ntBASIC12.26□□□□□ -0.45
RAB40CQ96S21 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB40CQ96S21 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.26□□□□□ -0.45
RAB40CQ96S21 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.26□□□□□ -0.45
RAB40CQ96S21 SAMD11P1-201ENST00000571429 661 ntBASIC12.26□□□□□ -0.45
RAB40CQ96S21 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.26□□□□□ -0.45
RAB40CQ96S21 MTDHP5-201ENST00000598980 586 ntBASIC12.26□□□□□ -0.45
RAB40CQ96S21 AL671883.3-201ENST00000603274 991 ntBASIC12.26□□□□□ -0.45
RAB40CQ96S21 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.26□□□□□ -0.45
RAB40CQ96S21 AC055717.3-201ENST00000622967 595 ntBASIC12.26□□□□□ -0.45
RAB40CQ96S21 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB40CQ96S21 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB40CQ96S21 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB40CQ96S21 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB40CQ96S21 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB40CQ96S21 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB40CQ96S21 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB40CQ96S21 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB40CQ96S21 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB40CQ96S21 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB40CQ96S21 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.26□□□□□ -0.45
RAB40CQ96S21 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.26□□□□□ -0.45
RAB40CQ96S21 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB40CQ96S21 UXT-AS1-201ENST00000590504 1525 ntBASIC12.26□□□□□ -0.45
RAB40CQ96S21 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.26□□□□□ -0.45
RAB40CQ96S21 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
RAB40CQ96S21 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.26□□□□□ -0.45
RAB40CQ96S21 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.26□□□□□ -0.45
RAB40CQ96S21 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB40CQ96S21 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
RAB40CQ96S21 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB40CQ96S21 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB40CQ96S21 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.26□□□□□ -0.45
RAB40CQ96S21 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
RAB40CQ96S21 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.25□□□□□ -0.45
RAB40CQ96S21 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.25□□□□□ -0.45
RAB40CQ96S21 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
RAB40CQ96S21 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB40CQ96S21 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB40CQ96S21 INE2-201ENST00000630399 1874 ntBASIC12.25□□□□□ -0.45
RAB40CQ96S21 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
RAB40CQ96S21 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB40CQ96S21 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB40CQ96S21 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms