Protein–RNA interactions for Protein: Q96QP1

ALPK1, Alpha-protein kinase 1, humanhuman

Predictions only

Length 1,244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK1Q96QP1 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.28□□□□□ -0.12
ALPK1Q96QP1 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ALPK1Q96QP1 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
ALPK1Q96QP1 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ALPK1Q96QP1 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.27□□□□□ -0.12
ALPK1Q96QP1 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ALPK1Q96QP1 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ALPK1Q96QP1 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ALPK1Q96QP1 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ALPK1Q96QP1 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.27□□□□□ -0.12
ALPK1Q96QP1 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
ALPK1Q96QP1 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
ALPK1Q96QP1 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ALPK1Q96QP1 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.27□□□□□ -0.12
ALPK1Q96QP1 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ALPK1Q96QP1 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ALPK1Q96QP1 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ALPK1Q96QP1 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
ALPK1Q96QP1 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ALPK1Q96QP1 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ALPK1Q96QP1 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ALPK1Q96QP1 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 IGHV3-71-201ENST00000523324 359 ntBASIC14.27□□□□□ -0.13
ALPK1Q96QP1 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 AC105021.1-202ENST00000570572 669 ntBASIC14.27□□□□□ -0.13
ALPK1Q96QP1 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 AL590560.3-201ENST00000623350 461 ntBASIC14.27□□□□□ -0.13
ALPK1Q96QP1 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ALPK1Q96QP1 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 HIST3H2BA-201ENST00000436555 524 ntBASIC14.26□□□□□ -0.13
ALPK1Q96QP1 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 SPTLC1P1-201ENST00000447199 261 ntBASIC14.26□□□□□ -0.13
ALPK1Q96QP1 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 MIR4453-201ENST00000584019 89 ntBASIC14.26□□□□□ -0.13
ALPK1Q96QP1 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
ALPK1Q96QP1 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms