Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 AC016397.2-201ENST00000624848 1985 ntBASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 AC005237.2-201ENST00000434368 219 ntBASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 AC025048.3-201ENST00000590609 569 ntBASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 AC007967.4-201ENST00000614700 386 ntBASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 AC005702.4-201ENST00000618393 416 ntBASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
NSMCE2Q96MF7 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 KRT18P32-201ENST00000424695 1287 ntBASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 SERBP1P3-201ENST00000459980 809 ntBASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 AL079307.3-201ENST00000556114 283 ntBASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 LINC00628-201ENST00000628516 1289 ntBASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 AF228730.6-201ENST00000641497 218 ntBASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 AC084121.3-201ENST00000641716 218 ntBASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NSMCE2Q96MF7 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms