Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.29■□□□□ 0.04
RTP4Q96DX8 KRT8P35-201ENST00000483942 1338 ntBASIC15.29■□□□□ 0.04
RTP4Q96DX8 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RTP4Q96DX8 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.29■□□□□ 0.04
RTP4Q96DX8 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.29■□□□□ 0.04
RTP4Q96DX8 RN7SKP230-201ENST00000365642 335 ntBASIC15.29■□□□□ 0.04
RTP4Q96DX8 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTP4Q96DX8 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RTP4Q96DX8 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RTP4Q96DX8 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
RTP4Q96DX8 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RTP4Q96DX8 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.29■□□□□ 0.04
RTP4Q96DX8 AL162726.2-201ENST00000438986 1017 ntBASIC15.29■□□□□ 0.04
RTP4Q96DX8 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.29■□□□□ 0.04
RTP4Q96DX8 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTP4Q96DX8 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.29■□□□□ 0.04
RTP4Q96DX8 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RTP4Q96DX8 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.29■□□□□ 0.04
RTP4Q96DX8 KRT18P25-201ENST00000508931 1278 ntBASIC15.29■□□□□ 0.04
RTP4Q96DX8 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTP4Q96DX8 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RTP4Q96DX8 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RTP4Q96DX8 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.29■□□□□ 0.04
RTP4Q96DX8 HILS1-202ENST00000545329 423 ntBASIC15.29■□□□□ 0.04
RTP4Q96DX8 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RTP4Q96DX8 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RTP4Q96DX8 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.29■□□□□ 0.04
RTP4Q96DX8 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RTP4Q96DX8 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.29■□□□□ 0.04
RTP4Q96DX8 MYADML-201ENST00000474610 2147 ntBASIC15.29■□□□□ 0.04
RTP4Q96DX8 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTP4Q96DX8 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTP4Q96DX8 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTP4Q96DX8 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.29■□□□□ 0.04
RTP4Q96DX8 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.29■□□□□ 0.04
RTP4Q96DX8 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.29■□□□□ 0.04
RTP4Q96DX8 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.29■□□□□ 0.04
RTP4Q96DX8 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTP4Q96DX8 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTP4Q96DX8 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTP4Q96DX8 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTP4Q96DX8 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RTP4Q96DX8 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RTP4Q96DX8 AC041040.2-201ENST00000622926 2899 ntBASIC15.28■□□□□ 0.04
RTP4Q96DX8 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTP4Q96DX8 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RTP4Q96DX8 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RTP4Q96DX8 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RTP4Q96DX8 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.28■□□□□ 0.04
RTP4Q96DX8 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RTP4Q96DX8 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTP4Q96DX8 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTP4Q96DX8 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTP4Q96DX8 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTP4Q96DX8 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.28■□□□□ 0.04
RTP4Q96DX8 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.28■□□□□ 0.04
RTP4Q96DX8 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
RTP4Q96DX8 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTP4Q96DX8 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.28■□□□□ 0.04
RTP4Q96DX8 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RTP4Q96DX8 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.28■□□□□ 0.04
RTP4Q96DX8 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RTP4Q96DX8 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.28■□□□□ 0.04
RTP4Q96DX8 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RTP4Q96DX8 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
RTP4Q96DX8 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
RTP4Q96DX8 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.28■□□□□ 0.04
RTP4Q96DX8 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.28■□□□□ 0.04
RTP4Q96DX8 WFDC1-204ENST00000613603 549 ntBASIC15.28■□□□□ 0.04
RTP4Q96DX8 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.28■□□□□ 0.04
RTP4Q96DX8 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.28■□□□□ 0.04
RTP4Q96DX8 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTP4Q96DX8 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTP4Q96DX8 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTP4Q96DX8 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTP4Q96DX8 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.28■□□□□ 0.04
RTP4Q96DX8 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTP4Q96DX8 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTP4Q96DX8 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RTP4Q96DX8 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTP4Q96DX8 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.28■□□□□ 0.04
RTP4Q96DX8 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTP4Q96DX8 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTP4Q96DX8 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTP4Q96DX8 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.28■□□□□ 0.04
RTP4Q96DX8 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RTP4Q96DX8 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RTP4Q96DX8 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTP4Q96DX8 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.28■□□□□ 0.04
RTP4Q96DX8 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RTP4Q96DX8 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RTP4Q96DX8 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RTP4Q96DX8 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RTP4Q96DX8 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.27■□□□□ 0.04
RTP4Q96DX8 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RTP4Q96DX8 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.27■□□□□ 0.04
RTP4Q96DX8 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RTP4Q96DX8 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RTP4Q96DX8 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
RTP4Q96DX8 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms