Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
USP9XQ93008 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
USP9XQ93008 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC12.84□□□□□ -0.35
USP9XQ93008 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
USP9XQ93008 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
USP9XQ93008 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
USP9XQ93008 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
USP9XQ93008 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
USP9XQ93008 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC12.84□□□□□ -0.35
USP9XQ93008 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
USP9XQ93008 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
USP9XQ93008 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC12.84□□□□□ -0.35
USP9XQ93008 CSNK1G2P1-201ENST00000442675 955 ntBASIC12.84□□□□□ -0.35
USP9XQ93008 ABHD17AP9-201ENST00000561925 548 ntBASIC12.84□□□□□ -0.35
USP9XQ93008 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
USP9XQ93008 AC027601.3-201ENST00000622907 509 ntBASIC12.84□□□□□ -0.35
USP9XQ93008 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
USP9XQ93008 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
USP9XQ93008 AC010491.1-201ENST00000563101 2797 ntBASIC12.84□□□□□ -0.35
USP9XQ93008 AC127383.1-201ENST00000444697 1800 ntBASIC12.84□□□□□ -0.35
USP9XQ93008 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
USP9XQ93008 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC12.84□□□□□ -0.35
USP9XQ93008 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
USP9XQ93008 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC12.84□□□□□ -0.35
USP9XQ93008 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC12.84□□□□□ -0.35
USP9XQ93008 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
USP9XQ93008 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
USP9XQ93008 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
USP9XQ93008 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
USP9XQ93008 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
USP9XQ93008 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
USP9XQ93008 NME6-208ENST00000435684 599 ntTSL 2 BASIC12.83□□□□□ -0.35
USP9XQ93008 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC12.83□□□□□ -0.35
USP9XQ93008 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC12.83□□□□□ -0.35
USP9XQ93008 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC12.83□□□□□ -0.35
USP9XQ93008 TLE2-205ENST00000586422 389 ntTSL 5 BASIC12.83□□□□□ -0.35
USP9XQ93008 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC12.83□□□□□ -0.35
USP9XQ93008 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC12.83□□□□□ -0.35
USP9XQ93008 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
USP9XQ93008 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
USP9XQ93008 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.83□□□□□ -0.36
USP9XQ93008 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
USP9XQ93008 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
USP9XQ93008 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
USP9XQ93008 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
USP9XQ93008 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
USP9XQ93008 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC12.83□□□□□ -0.36
USP9XQ93008 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
USP9XQ93008 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
USP9XQ93008 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
USP9XQ93008 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
USP9XQ93008 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
USP9XQ93008 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC12.83□□□□□ -0.36
USP9XQ93008 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
USP9XQ93008 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
USP9XQ93008 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
USP9XQ93008 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
USP9XQ93008 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
USP9XQ93008 AL451000.1-201ENST00000451300 1186 ntBASIC12.83□□□□□ -0.36
USP9XQ93008 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC12.83□□□□□ -0.36
USP9XQ93008 AC003686.1-201ENST00000550956 1034 ntBASIC12.83□□□□□ -0.36
USP9XQ93008 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.83□□□□□ -0.36
USP9XQ93008 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC12.83□□□□□ -0.36
USP9XQ93008 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC12.83□□□□□ -0.36
USP9XQ93008 AP000322.3-201ENST00000608665 388 ntBASIC12.83□□□□□ -0.36
USP9XQ93008 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
USP9XQ93008 AC021305.1-201ENST00000520656 1514 ntBASIC12.83□□□□□ -0.36
USP9XQ93008 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
USP9XQ93008 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC12.83□□□□□ -0.36
USP9XQ93008 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
USP9XQ93008 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
USP9XQ93008 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
USP9XQ93008 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
USP9XQ93008 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.83□□□□□ -0.36
USP9XQ93008 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
USP9XQ93008 AC003102.2-201ENST00000589195 1469 ntBASIC12.83□□□□□ -0.36
USP9XQ93008 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
USP9XQ93008 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
USP9XQ93008 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
USP9XQ93008 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
USP9XQ93008 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
USP9XQ93008 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
USP9XQ93008 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
USP9XQ93008 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
USP9XQ93008 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
USP9XQ93008 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.83□□□□□ -0.36
USP9XQ93008 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
USP9XQ93008 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
USP9XQ93008 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
USP9XQ93008 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
USP9XQ93008 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC12.82□□□□□ -0.36
USP9XQ93008 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
USP9XQ93008 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
USP9XQ93008 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
USP9XQ93008 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
USP9XQ93008 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC12.82□□□□□ -0.36
USP9XQ93008 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.82□□□□□ -0.36
USP9XQ93008 TRMT112P3-201ENST00000580149 358 ntBASIC12.82□□□□□ -0.36
USP9XQ93008 AL160191.2-201ENST00000603975 601 ntBASIC12.82□□□□□ -0.36
USP9XQ93008 HELLS-212ENST00000630929 400 ntTSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms