Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.95□□□□□ -0.18
HPS1Q92902 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
HPS1Q92902 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HPS1Q92902 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HPS1Q92902 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HPS1Q92902 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HPS1Q92902 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HPS1Q92902 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HPS1Q92902 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
HPS1Q92902 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
HPS1Q92902 AC097359.2-201ENST00000604992 2389 ntBASIC13.95□□□□□ -0.18
HPS1Q92902 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HPS1Q92902 PCGF3-213ENST00000620529 1899 ntBASIC13.95□□□□□ -0.18
HPS1Q92902 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HPS1Q92902 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HPS1Q92902 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HPS1Q92902 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HPS1Q92902 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HPS1Q92902 AC022762.2-201ENST00000600308 1353 ntBASIC13.95□□□□□ -0.18
HPS1Q92902 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HPS1Q92902 UXT-AS1-201ENST00000590504 1525 ntBASIC13.95□□□□□ -0.18
HPS1Q92902 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.95□□□□□ -0.18
HPS1Q92902 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HPS1Q92902 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.95□□□□□ -0.18
HPS1Q92902 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HPS1Q92902 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
HPS1Q92902 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HPS1Q92902 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
HPS1Q92902 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HPS1Q92902 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HPS1Q92902 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HPS1Q92902 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HPS1Q92902 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
HPS1Q92902 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HPS1Q92902 AC011474.4-201ENST00000623523 2076 ntBASIC13.94□□□□□ -0.18
HPS1Q92902 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HPS1Q92902 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
HPS1Q92902 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.94□□□□□ -0.18
HPS1Q92902 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HPS1Q92902 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
HPS1Q92902 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.94□□□□□ -0.18
HPS1Q92902 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HPS1Q92902 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.94□□□□□ -0.18
HPS1Q92902 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HPS1Q92902 FAM58DP-201ENST00000428076 619 ntBASIC13.94□□□□□ -0.18
HPS1Q92902 AC055876.3-201ENST00000431496 288 ntBASIC13.94□□□□□ -0.18
HPS1Q92902 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.94□□□□□ -0.18
HPS1Q92902 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.94□□□□□ -0.18
HPS1Q92902 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.94□□□□□ -0.18
HPS1Q92902 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.94□□□□□ -0.18
HPS1Q92902 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC13.94□□□□□ -0.18
HPS1Q92902 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
HPS1Q92902 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.94□□□□□ -0.18
HPS1Q92902 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.94□□□□□ -0.18
HPS1Q92902 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.94□□□□□ -0.18
HPS1Q92902 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.94□□□□□ -0.18
HPS1Q92902 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC13.94□□□□□ -0.18
HPS1Q92902 AC079791.1-201ENST00000605356 973 ntBASIC13.94□□□□□ -0.18
HPS1Q92902 AC138649.4-201ENST00000612222 287 ntBASIC13.94□□□□□ -0.18
HPS1Q92902 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HPS1Q92902 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.94□□□□□ -0.18
HPS1Q92902 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HPS1Q92902 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HPS1Q92902 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HPS1Q92902 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.94□□□□□ -0.18
HPS1Q92902 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HPS1Q92902 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HPS1Q92902 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
HPS1Q92902 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
HPS1Q92902 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
HPS1Q92902 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HPS1Q92902 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HPS1Q92902 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HPS1Q92902 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HPS1Q92902 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HPS1Q92902 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HPS1Q92902 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HPS1Q92902 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HPS1Q92902 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HPS1Q92902 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.93□□□□□ -0.18
HPS1Q92902 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.93□□□□□ -0.18
HPS1Q92902 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
HPS1Q92902 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HPS1Q92902 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.93□□□□□ -0.18
HPS1Q92902 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HPS1Q92902 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HPS1Q92902 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HPS1Q92902 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HPS1Q92902 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HPS1Q92902 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.93□□□□□ -0.18
HPS1Q92902 AC107890.1-201ENST00000422478 521 ntBASIC13.93□□□□□ -0.18
HPS1Q92902 GPS2P2-201ENST00000430745 888 ntBASIC13.93□□□□□ -0.18
HPS1Q92902 IMMP2L-204ENST00000447215 1164 ntTSL 3 BASIC13.93□□□□□ -0.18
HPS1Q92902 UPF3AP2-201ENST00000457924 1132 ntBASIC13.93□□□□□ -0.18
HPS1Q92902 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.93□□□□□ -0.18
HPS1Q92902 INGX-202ENST00000489074 768 ntBASIC13.93□□□□□ -0.18
HPS1Q92902 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
HPS1Q92902 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.93□□□□□ -0.18
HPS1Q92902 AC140878.1-201ENST00000565277 250 ntBASIC13.93□□□□□ -0.18
HPS1Q92902 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms