Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
AP3S1Q92572 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP3S1Q92572 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
AP3S1Q92572 RPS2P28-201ENST00000314255 741 ntBASIC13.3□□□□□ -0.28
AP3S1Q92572 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
AP3S1Q92572 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
AP3S1Q92572 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.3□□□□□ -0.28
AP3S1Q92572 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP3S1Q92572 RHOQP3-201ENST00000437982 621 ntBASIC13.3□□□□□ -0.28
AP3S1Q92572 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.3□□□□□ -0.28
AP3S1Q92572 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
AP3S1Q92572 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
AP3S1Q92572 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.3□□□□□ -0.28
AP3S1Q92572 AL138918.1-201ENST00000568306 659 ntBASIC13.3□□□□□ -0.28
AP3S1Q92572 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.3□□□□□ -0.28
AP3S1Q92572 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.3□□□□□ -0.28
AP3S1Q92572 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
AP3S1Q92572 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
AP3S1Q92572 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.3□□□□□ -0.28
AP3S1Q92572 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
AP3S1Q92572 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP3S1Q92572 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.3□□□□□ -0.28
AP3S1Q92572 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
AP3S1Q92572 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP3S1Q92572 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
AP3S1Q92572 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
AP3S1Q92572 AC020658.7-201ENST00000624274 2442 ntBASIC13.3□□□□□ -0.28
AP3S1Q92572 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP3S1Q92572 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP3S1Q92572 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP3S1Q92572 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
AP3S1Q92572 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.3□□□□□ -0.28
AP3S1Q92572 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
AP3S1Q92572 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP3S1Q92572 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP3S1Q92572 AC020910.6-201ENST00000623084 1459 ntBASIC13.29□□□□□ -0.28
AP3S1Q92572 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S1Q92572 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.29□□□□□ -0.28
AP3S1Q92572 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC13.29□□□□□ -0.28
AP3S1Q92572 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S1Q92572 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S1Q92572 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S1Q92572 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S1Q92572 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S1Q92572 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S1Q92572 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S1Q92572 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S1Q92572 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S1Q92572 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.29□□□□□ -0.28
AP3S1Q92572 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S1Q92572 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S1Q92572 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S1Q92572 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S1Q92572 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.29□□□□□ -0.28
AP3S1Q92572 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S1Q92572 CRYGEP-201ENST00000412192 528 ntBASIC13.29□□□□□ -0.28
AP3S1Q92572 IGLL3P-201ENST00000412472 434 ntBASIC13.29□□□□□ -0.28
AP3S1Q92572 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.29□□□□□ -0.28
AP3S1Q92572 TMPOP1-202ENST00000424642 1267 ntBASIC13.29□□□□□ -0.28
AP3S1Q92572 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.29□□□□□ -0.28
AP3S1Q92572 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.29□□□□□ -0.28
AP3S1Q92572 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.29□□□□□ -0.28
AP3S1Q92572 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.29□□□□□ -0.28
AP3S1Q92572 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.29□□□□□ -0.28
AP3S1Q92572 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.29□□□□□ -0.28
AP3S1Q92572 AC010507.1-201ENST00000633895 436 ntBASIC13.29□□□□□ -0.28
AP3S1Q92572 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC13.29□□□□□ -0.28
AP3S1Q92572 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.29□□□□□ -0.28
AP3S1Q92572 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S1Q92572 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S1Q92572 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S1Q92572 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S1Q92572 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.29□□□□□ -0.28
AP3S1Q92572 AC114271.1-201ENST00000612689 2813 ntBASIC13.29□□□□□ -0.28
AP3S1Q92572 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S1Q92572 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
AP3S1Q92572 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S1Q92572 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
AP3S1Q92572 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S1Q92572 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.28□□□□□ -0.28
AP3S1Q92572 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
AP3S1Q92572 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.28□□□□□ -0.28
AP3S1Q92572 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.28□□□□□ -0.28
AP3S1Q92572 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S1Q92572 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
AP3S1Q92572 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
AP3S1Q92572 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S1Q92572 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.28□□□□□ -0.28
AP3S1Q92572 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.28□□□□□ -0.28
AP3S1Q92572 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S1Q92572 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
AP3S1Q92572 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S1Q92572 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
AP3S1Q92572 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
AP3S1Q92572 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.28□□□□□ -0.28
AP3S1Q92572 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S1Q92572 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S1Q92572 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.28□□□□□ -0.28
AP3S1Q92572 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S1Q92572 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms