Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 AC089987.1-201ENST00000551654 2209 ntBASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 DUX4L47-201ENST00000566374 394 ntBASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 PRSS30P-206ENST00000641773 873 ntBASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 AC012617.1-204ENST00000586340 2305 ntBASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 AC100757.3-201ENST00000622361 1406 ntBASIC15.09■□□□□ 0.01
SLC44A1Q8WWI5 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SLC44A1Q8WWI5 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
SLC44A1Q8WWI5 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
SLC44A1Q8WWI5 BTBD7P1-201ENST00000447253 1453 ntBASIC15.08■□□□□ 0.01
SLC44A1Q8WWI5 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
SLC44A1Q8WWI5 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SLC44A1Q8WWI5 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
SLC44A1Q8WWI5 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SLC44A1Q8WWI5 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.08■□□□□ 0
SLC44A1Q8WWI5 AC107890.1-201ENST00000422478 521 ntBASIC15.08■□□□□ 0
SLC44A1Q8WWI5 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 TSEN15P1-201ENST00000423257 515 ntBASIC15.08■□□□□ 0
SLC44A1Q8WWI5 PMS2P2-201ENST00000425039 1128 ntBASIC15.08■□□□□ 0
SLC44A1Q8WWI5 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 AL589987.1-201ENST00000453380 819 ntBASIC15.08■□□□□ 0
SLC44A1Q8WWI5 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.08■□□□□ 0
SLC44A1Q8WWI5 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 AL590560.3-201ENST00000623350 461 ntBASIC15.08■□□□□ 0
SLC44A1Q8WWI5 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 206.8 ms