Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RNF138Q8WVD3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
RNF138Q8WVD3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
RNF138Q8WVD3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
RNF138Q8WVD3 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.44□□□□□ -0.26
RNF138Q8WVD3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
RNF138Q8WVD3 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNF138Q8WVD3 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
RNF138Q8WVD3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNF138Q8WVD3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNF138Q8WVD3 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RNF138Q8WVD3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RNF138Q8WVD3 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNF138Q8WVD3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNF138Q8WVD3 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
RNF138Q8WVD3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 AL596257.1-201ENST00000641463 2694 ntBASIC13.43□□□□□ -0.26
RNF138Q8WVD3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 TUBB8P8-201ENST00000458717 1058 ntBASIC13.43□□□□□ -0.26
RNF138Q8WVD3 FAM8A2P-201ENST00000528813 1142 ntBASIC13.43□□□□□ -0.26
RNF138Q8WVD3 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 BNIP3P13-201ENST00000599968 566 ntBASIC13.43□□□□□ -0.26
RNF138Q8WVD3 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 AL023803.2-201ENST00000620080 638 ntBASIC13.43□□□□□ -0.26
RNF138Q8WVD3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF138Q8WVD3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.42□□□□□ -0.26
RNF138Q8WVD3 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.42□□□□□ -0.26
RNF138Q8WVD3 AC012441.2-201ENST00000444843 739 ntBASIC13.42□□□□□ -0.26
RNF138Q8WVD3 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 AC108725.1-201ENST00000495472 409 ntBASIC13.42□□□□□ -0.26
RNF138Q8WVD3 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 SORD2P-201ENST00000558556 1069 ntBASIC13.42□□□□□ -0.26
RNF138Q8WVD3 AC027237.1-201ENST00000560942 655 ntBASIC13.42□□□□□ -0.26
RNF138Q8WVD3 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms