Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 AC116345.2-201ENST00000512837 523 ntBASIC13.9□□□□□ -0.18
CT55Q8WUE5 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.9□□□□□ -0.18
CT55Q8WUE5 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.9□□□□□ -0.18
CT55Q8WUE5 PRKXP1-201ENST00000561423 1122 ntBASIC13.9□□□□□ -0.18
CT55Q8WUE5 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CT55Q8WUE5 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CT55Q8WUE5 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC13.9□□□□□ -0.18
CT55Q8WUE5 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.9□□□□□ -0.18
CT55Q8WUE5 AC128714.1-201ENST00000637035 887 ntBASIC13.9□□□□□ -0.18
CT55Q8WUE5 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.9□□□□□ -0.18
CT55Q8WUE5 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CT55Q8WUE5 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CT55Q8WUE5 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CT55Q8WUE5 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CT55Q8WUE5 AC136759.1-202ENST00000530858 2194 ntBASIC13.9□□□□□ -0.18
CT55Q8WUE5 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CT55Q8WUE5 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CT55Q8WUE5 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CT55Q8WUE5 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CT55Q8WUE5 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CT55Q8WUE5 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.9□□□□□ -0.18
CT55Q8WUE5 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CT55Q8WUE5 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CT55Q8WUE5 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CT55Q8WUE5 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CT55Q8WUE5 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CT55Q8WUE5 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CT55Q8WUE5 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CT55Q8WUE5 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
CT55Q8WUE5 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CT55Q8WUE5 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CT55Q8WUE5 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CT55Q8WUE5 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CT55Q8WUE5 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.89□□□□□ -0.19
CT55Q8WUE5 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CT55Q8WUE5 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CT55Q8WUE5 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CT55Q8WUE5 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CT55Q8WUE5 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
CT55Q8WUE5 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CT55Q8WUE5 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.89□□□□□ -0.19
CT55Q8WUE5 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CT55Q8WUE5 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CT55Q8WUE5 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.89□□□□□ -0.19
CT55Q8WUE5 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CT55Q8WUE5 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.89□□□□□ -0.19
CT55Q8WUE5 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CT55Q8WUE5 MIR33B-201ENST00000385104 96 ntBASIC13.89□□□□□ -0.19
CT55Q8WUE5 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CT55Q8WUE5 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.89□□□□□ -0.19
CT55Q8WUE5 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC13.89□□□□□ -0.19
CT55Q8WUE5 MPRIPP1-201ENST00000452433 1089 ntBASIC13.89□□□□□ -0.19
CT55Q8WUE5 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.89□□□□□ -0.19
CT55Q8WUE5 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC13.89□□□□□ -0.19
CT55Q8WUE5 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.89□□□□□ -0.19
CT55Q8WUE5 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.89□□□□□ -0.19
CT55Q8WUE5 RTN3P1-201ENST00000536295 711 ntBASIC13.89□□□□□ -0.19
CT55Q8WUE5 AC131206.1-201ENST00000538078 1211 ntBASIC13.89□□□□□ -0.19
CT55Q8WUE5 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.89□□□□□ -0.19
CT55Q8WUE5 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.89□□□□□ -0.19
CT55Q8WUE5 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC13.89□□□□□ -0.19
CT55Q8WUE5 AC012044.1-201ENST00000603431 297 ntBASIC13.89□□□□□ -0.19
CT55Q8WUE5 BX088702.1-201ENST00000610784 235 ntBASIC13.89□□□□□ -0.19
CT55Q8WUE5 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CT55Q8WUE5 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.89□□□□□ -0.19
CT55Q8WUE5 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.89□□□□□ -0.19
CT55Q8WUE5 ZBED1P1-201ENST00000502364 1930 ntBASIC13.89□□□□□ -0.19
CT55Q8WUE5 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CT55Q8WUE5 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.89□□□□□ -0.19
CT55Q8WUE5 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CT55Q8WUE5 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CT55Q8WUE5 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.88□□□□□ -0.19
CT55Q8WUE5 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CT55Q8WUE5 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.88□□□□□ -0.19
CT55Q8WUE5 AC046158.3-201ENST00000624947 2558 ntBASIC13.88□□□□□ -0.19
CT55Q8WUE5 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CT55Q8WUE5 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.88□□□□□ -0.19
CT55Q8WUE5 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.88□□□□□ -0.19
CT55Q8WUE5 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CT55Q8WUE5 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.88□□□□□ -0.19
CT55Q8WUE5 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CT55Q8WUE5 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CT55Q8WUE5 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CT55Q8WUE5 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CT55Q8WUE5 SSR4P1-203ENST00000599569 2260 ntBASIC13.88□□□□□ -0.19
CT55Q8WUE5 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CT55Q8WUE5 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CT55Q8WUE5 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
CT55Q8WUE5 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CT55Q8WUE5 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC13.88□□□□□ -0.19
CT55Q8WUE5 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
CT55Q8WUE5 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CT55Q8WUE5 MPV17-204ENST00000399052 749 ntTSL 4 BASIC13.88□□□□□ -0.19
CT55Q8WUE5 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.88□□□□□ -0.19
CT55Q8WUE5 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC13.88□□□□□ -0.19
CT55Q8WUE5 AC078875.1-201ENST00000431907 724 ntBASIC13.88□□□□□ -0.19
CT55Q8WUE5 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC13.88□□□□□ -0.19
CT55Q8WUE5 AC073150.1-201ENST00000450406 1084 ntBASIC13.88□□□□□ -0.19
CT55Q8WUE5 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13.88□□□□□ -0.19
CT55Q8WUE5 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms