Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SNED1Q8TER0 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNED1Q8TER0 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNED1Q8TER0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SNED1Q8TER0 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNED1Q8TER0 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SNED1Q8TER0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SNED1Q8TER0 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNED1Q8TER0 MARK2P16-201ENST00000605714 1723 ntBASIC17.91■□□□□ 0.46
SNED1Q8TER0 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNED1Q8TER0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNED1Q8TER0 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.91■□□□□ 0.46
SNED1Q8TER0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
SNED1Q8TER0 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC17.9■□□□□ 0.46
SNED1Q8TER0 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SNED1Q8TER0 JTB-202ENST00000356648 1040 ntTSL 2 BASIC17.9■□□□□ 0.46
SNED1Q8TER0 HLA-DMA-203ENST00000395305 777 ntBASIC17.9■□□□□ 0.46
SNED1Q8TER0 GUSBP10-201ENST00000417412 665 ntBASIC17.9■□□□□ 0.46
SNED1Q8TER0 IDS-203ENST00000428056 1213 ntTSL 2 BASIC17.9■□□□□ 0.46
SNED1Q8TER0 AL354861.1-201ENST00000445213 355 ntBASIC17.9■□□□□ 0.46
SNED1Q8TER0 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SNED1Q8TER0 RN7SL396P-201ENST00000471086 295 ntBASIC17.9■□□□□ 0.46
SNED1Q8TER0 REEP5-205ENST00000504247 480 ntTSL 5 BASIC17.9■□□□□ 0.46
SNED1Q8TER0 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC17.9■□□□□ 0.46
SNED1Q8TER0 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC17.9■□□□□ 0.46
SNED1Q8TER0 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC17.9■□□□□ 0.46
SNED1Q8TER0 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC17.9■□□□□ 0.46
SNED1Q8TER0 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNED1Q8TER0 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.9■□□□□ 0.46
SNED1Q8TER0 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SNED1Q8TER0 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.9■□□□□ 0.46
SNED1Q8TER0 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SNED1Q8TER0 PAUPAR-201ENST00000630360 2965 ntBASIC17.9■□□□□ 0.46
SNED1Q8TER0 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
SNED1Q8TER0 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.9■□□□□ 0.46
SNED1Q8TER0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SNED1Q8TER0 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.9■□□□□ 0.46
SNED1Q8TER0 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.9■□□□□ 0.46
SNED1Q8TER0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SNED1Q8TER0 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNED1Q8TER0 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNED1Q8TER0 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC17.89■□□□□ 0.46
SNED1Q8TER0 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC17.89■□□□□ 0.46
SNED1Q8TER0 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SNED1Q8TER0 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SNED1Q8TER0 C2orf69P1-201ENST00000563532 1093 ntBASIC17.89■□□□□ 0.46
SNED1Q8TER0 MIR3180-2-201ENST00000581748 88 ntBASIC17.89■□□□□ 0.46
SNED1Q8TER0 RN7SL596P-201ENST00000582123 288 ntBASIC17.89■□□□□ 0.46
SNED1Q8TER0 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
SNED1Q8TER0 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SNED1Q8TER0 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC17.89■□□□□ 0.46
SNED1Q8TER0 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC17.89■□□□□ 0.46
SNED1Q8TER0 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SNED1Q8TER0 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
SNED1Q8TER0 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SNED1Q8TER0 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.89■□□□□ 0.45
SNED1Q8TER0 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SNED1Q8TER0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNED1Q8TER0 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SNED1Q8TER0 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.89■□□□□ 0.45
SNED1Q8TER0 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.89■□□□□ 0.45
SNED1Q8TER0 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNED1Q8TER0 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNED1Q8TER0 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNED1Q8TER0 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNED1Q8TER0 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SNED1Q8TER0 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNED1Q8TER0 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNED1Q8TER0 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SNED1Q8TER0 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.89■□□□□ 0.45
SNED1Q8TER0 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC17.89■□□□□ 0.45
SNED1Q8TER0 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNED1Q8TER0 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.89■□□□□ 0.45
SNED1Q8TER0 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SNED1Q8TER0 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC17.89■□□□□ 0.45
SNED1Q8TER0 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC17.89■□□□□ 0.45
SNED1Q8TER0 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC17.89■□□□□ 0.45
SNED1Q8TER0 CR383656.3-201ENST00000551315 183 ntBASIC17.89■□□□□ 0.45
SNED1Q8TER0 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
SNED1Q8TER0 FO393412.1-201ENST00000619841 382 ntBASIC17.89■□□□□ 0.45
SNED1Q8TER0 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.89■□□□□ 0.45
SNED1Q8TER0 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNED1Q8TER0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SNED1Q8TER0 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC17.88■□□□□ 0.45
SNED1Q8TER0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SNED1Q8TER0 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SNED1Q8TER0 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNED1Q8TER0 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.88■□□□□ 0.45
SNED1Q8TER0 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNED1Q8TER0 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SNED1Q8TER0 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SNED1Q8TER0 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNED1Q8TER0 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SNED1Q8TER0 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNED1Q8TER0 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SNED1Q8TER0 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNED1Q8TER0 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNED1Q8TER0 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SNED1Q8TER0 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC17.88■□□□□ 0.45
SNED1Q8TER0 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms