Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 GNG10P1-201ENST00000452289 199 ntBASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 GAS7-216ENST00000583882 553 ntTSL 5 BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 AL121949.3-201ENST00000406684 385 ntBASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 RN7SL375P-201ENST00000492442 298 ntBASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 CES1P2-201ENST00000566467 1242 ntBASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 NHP2P1-201ENST00000335274 462 ntBASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 AL035414.1-201ENST00000451327 857 ntBASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 PFN2-212ENST00000490975 858 ntTSL 4 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 KNOP1P1-201ENST00000542108 989 ntBASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 AC091769.1-201ENST00000619576 568 ntBASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 LINC01101-201ENST00000622953 1884 ntBASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 F10-203ENST00000409306 1450 ntTSL 3 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 KRT8P18-201ENST00000413425 1445 ntBASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 LINP1-201ENST00000417112 917 ntTSL 2 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 AC092573.1-201ENST00000433054 884 ntBASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 IGHEP2-201ENST00000519308 1256 ntBASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 HPX-213ENST00000615166 826 ntTSL 5 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 AC090386.2-201ENST00000623010 1039 ntBASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC9.76□□□□□ -0.85
ALMS1Q8TCU4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms