Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF217Q8TC41 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNF217Q8TC41 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF217Q8TC41 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF217Q8TC41 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF217Q8TC41 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.69□□□□□ -0.06
RNF217Q8TC41 PNPLA8-206ENST00000436062 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF217Q8TC41 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC14.69□□□□□ -0.06
RNF217Q8TC41 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF217Q8TC41 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
RNF217Q8TC41 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.69□□□□□ -0.06
RNF217Q8TC41 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.69□□□□□ -0.06
RNF217Q8TC41 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF217Q8TC41 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RNF217Q8TC41 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNF217Q8TC41 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RNF217Q8TC41 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.68□□□□□ -0.06
RNF217Q8TC41 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF217Q8TC41 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF217Q8TC41 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
RNF217Q8TC41 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF217Q8TC41 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RNF217Q8TC41 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF217Q8TC41 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF217Q8TC41 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF217Q8TC41 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF217Q8TC41 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.68□□□□□ -0.06
RNF217Q8TC41 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF217Q8TC41 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.68□□□□□ -0.06
RNF217Q8TC41 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.68□□□□□ -0.06
RNF217Q8TC41 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF217Q8TC41 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.68□□□□□ -0.06
RNF217Q8TC41 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RNF217Q8TC41 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.68□□□□□ -0.06
RNF217Q8TC41 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.68□□□□□ -0.06
RNF217Q8TC41 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
RNF217Q8TC41 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF217Q8TC41 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF217Q8TC41 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF217Q8TC41 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.68□□□□□ -0.06
RNF217Q8TC41 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF217Q8TC41 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF217Q8TC41 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF217Q8TC41 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF217Q8TC41 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF217Q8TC41 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF217Q8TC41 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF217Q8TC41 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
RNF217Q8TC41 AC018892.3-201ENST00000623986 2499 ntBASIC14.68□□□□□ -0.06
RNF217Q8TC41 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF217Q8TC41 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RNF217Q8TC41 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF217Q8TC41 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF217Q8TC41 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF217Q8TC41 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RNF217Q8TC41 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF217Q8TC41 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF217Q8TC41 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF217Q8TC41 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RNF217Q8TC41 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF217Q8TC41 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
RNF217Q8TC41 RGL4-209ENST00000612432 2649 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RNF217Q8TC41 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF217Q8TC41 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.67□□□□□ -0.06
RNF217Q8TC41 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF217Q8TC41 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
RNF217Q8TC41 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF217Q8TC41 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.67□□□□□ -0.06
RNF217Q8TC41 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RNF217Q8TC41 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF217Q8TC41 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.67□□□□□ -0.06
RNF217Q8TC41 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
RNF217Q8TC41 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF217Q8TC41 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
RNF217Q8TC41 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.67□□□□□ -0.06
RNF217Q8TC41 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RNF217Q8TC41 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
RNF217Q8TC41 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF217Q8TC41 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.67□□□□□ -0.06
RNF217Q8TC41 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.67□□□□□ -0.06
RNF217Q8TC41 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.67□□□□□ -0.06
RNF217Q8TC41 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.67□□□□□ -0.06
RNF217Q8TC41 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF217Q8TC41 AC073389.1-201ENST00000595595 795 ntBASIC14.67□□□□□ -0.06
RNF217Q8TC41 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
RNF217Q8TC41 GPALPP1-207ENST00000611650 899 ntBASIC14.67□□□□□ -0.06
RNF217Q8TC41 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
RNF217Q8TC41 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RNF217Q8TC41 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF217Q8TC41 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF217Q8TC41 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF217Q8TC41 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
RNF217Q8TC41 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
RNF217Q8TC41 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF217Q8TC41 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF217Q8TC41 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
RNF217Q8TC41 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF217Q8TC41 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF217Q8TC41 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF217Q8TC41 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms