Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
LPCAT1Q8NF37 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LPCAT1Q8NF37 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LPCAT1Q8NF37 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LPCAT1Q8NF37 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 U91328.1-201ENST00000437528 223 ntBASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 FO681548.1-201ENST00000455617 1132 ntBASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 AC013726.1-201ENST00000563747 2285 ntBASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 AL365209.1-201ENST00000624418 6473 ntBASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 CICP24-201ENST00000605464 2705 ntBASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LPCAT1Q8NF37 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 AC016694.1-201ENST00000434179 700 ntBASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 AC245100.3-201ENST00000441281 285 ntBASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 AC234783.1-201ENST00000441761 496 ntBASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 AL590640.2-201ENST00000457038 527 ntBASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 AC007551.1-201ENST00000457394 519 ntBASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 KRT17P8-201ENST00000540749 863 ntBASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 ECM1P1-201ENST00000604092 1279 ntBASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 ENPP7P14-201ENST00000621765 1040 ntBASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 AC007686.3-201ENST00000619017 3487 ntBASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LPCAT1Q8NF37 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms