Protein–RNA interactions for Protein: Q8NE62

CHDH, Choline dehydrogenase, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHDHQ8NE62 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.34□□□□□ -0.11
CHDHQ8NE62 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CHDHQ8NE62 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CHDHQ8NE62 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.33□□□□□ -0.11
CHDHQ8NE62 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CHDHQ8NE62 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CHDHQ8NE62 AL359183.1-201ENST00000623796 2132 ntBASIC14.33□□□□□ -0.11
CHDHQ8NE62 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CHDHQ8NE62 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
CHDHQ8NE62 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
CHDHQ8NE62 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CHDHQ8NE62 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHDHQ8NE62 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CHDHQ8NE62 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHDHQ8NE62 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.33□□□□□ -0.12
CHDHQ8NE62 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
CHDHQ8NE62 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.33□□□□□ -0.12
CHDHQ8NE62 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CHDHQ8NE62 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.33□□□□□ -0.12
CHDHQ8NE62 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.33□□□□□ -0.12
CHDHQ8NE62 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.33□□□□□ -0.12
CHDHQ8NE62 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.33□□□□□ -0.12
CHDHQ8NE62 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHDHQ8NE62 AC135586.1-201ENST00000539323 574 ntBASIC14.33□□□□□ -0.12
CHDHQ8NE62 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.33□□□□□ -0.12
CHDHQ8NE62 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.33□□□□□ -0.12
CHDHQ8NE62 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.33□□□□□ -0.12
CHDHQ8NE62 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.33□□□□□ -0.12
CHDHQ8NE62 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.33□□□□□ -0.12
CHDHQ8NE62 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.33□□□□□ -0.12
CHDHQ8NE62 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CHDHQ8NE62 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHDHQ8NE62 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.33□□□□□ -0.12
CHDHQ8NE62 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHDHQ8NE62 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.33□□□□□ -0.12
CHDHQ8NE62 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CHDHQ8NE62 CICP17-201ENST00000418553 2377 ntBASIC14.33□□□□□ -0.12
CHDHQ8NE62 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHDHQ8NE62 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.33□□□□□ -0.12
CHDHQ8NE62 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHDHQ8NE62 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.33□□□□□ -0.12
CHDHQ8NE62 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHDHQ8NE62 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.33□□□□□ -0.12
CHDHQ8NE62 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHDHQ8NE62 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CHDHQ8NE62 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHDHQ8NE62 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.33□□□□□ -0.12
CHDHQ8NE62 AC152010.1-201ENST00000415779 2006 ntBASIC14.32□□□□□ -0.12
CHDHQ8NE62 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.32□□□□□ -0.12
CHDHQ8NE62 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.32□□□□□ -0.12
CHDHQ8NE62 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHDHQ8NE62 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CHDHQ8NE62 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHDHQ8NE62 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CHDHQ8NE62 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHDHQ8NE62 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.32□□□□□ -0.12
CHDHQ8NE62 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
CHDHQ8NE62 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.32□□□□□ -0.12
CHDHQ8NE62 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CHDHQ8NE62 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CHDHQ8NE62 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.32□□□□□ -0.12
CHDHQ8NE62 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHDHQ8NE62 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHDHQ8NE62 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHDHQ8NE62 AC098614.1-201ENST00000368528 745 ntBASIC14.32□□□□□ -0.12
CHDHQ8NE62 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CHDHQ8NE62 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.32□□□□□ -0.12
CHDHQ8NE62 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHDHQ8NE62 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.32□□□□□ -0.12
CHDHQ8NE62 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.32□□□□□ -0.12
CHDHQ8NE62 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.32□□□□□ -0.12
CHDHQ8NE62 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.32□□□□□ -0.12
CHDHQ8NE62 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.32□□□□□ -0.12
CHDHQ8NE62 SPDYE18-201ENST00000510091 1050 ntBASIC14.32□□□□□ -0.12
CHDHQ8NE62 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.32□□□□□ -0.12
CHDHQ8NE62 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.32□□□□□ -0.12
CHDHQ8NE62 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.32□□□□□ -0.12
CHDHQ8NE62 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.32□□□□□ -0.12
CHDHQ8NE62 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.32□□□□□ -0.12
CHDHQ8NE62 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHDHQ8NE62 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHDHQ8NE62 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHDHQ8NE62 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CHDHQ8NE62 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
CHDHQ8NE62 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHDHQ8NE62 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHDHQ8NE62 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHDHQ8NE62 SBF1P1-201ENST00000444527 5631 ntBASIC14.32□□□□□ -0.12
CHDHQ8NE62 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHDHQ8NE62 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CHDHQ8NE62 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHDHQ8NE62 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHDHQ8NE62 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHDHQ8NE62 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.32□□□□□ -0.12
CHDHQ8NE62 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.32□□□□□ -0.12
CHDHQ8NE62 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHDHQ8NE62 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHDHQ8NE62 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHDHQ8NE62 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHDHQ8NE62 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms