Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CPEB3Q8NE35 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.21□□□□□ -0.29
CPEB3Q8NE35 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CPEB3Q8NE35 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CPEB3Q8NE35 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CPEB3Q8NE35 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.21□□□□□ -0.29
CPEB3Q8NE35 ACTBP8-201ENST00000403258 1108 ntBASIC13.21□□□□□ -0.29
CPEB3Q8NE35 AL512384.1-201ENST00000406683 331 ntBASIC13.21□□□□□ -0.29
CPEB3Q8NE35 EIF3FP3-201ENST00000434851 1086 ntBASIC13.21□□□□□ -0.29
CPEB3Q8NE35 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.21□□□□□ -0.29
CPEB3Q8NE35 AC022616.1-201ENST00000518688 554 ntBASIC13.21□□□□□ -0.29
CPEB3Q8NE35 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
CPEB3Q8NE35 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.21□□□□□ -0.29
CPEB3Q8NE35 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
CPEB3Q8NE35 PTP4A1P2-201ENST00000546033 454 ntBASIC13.21□□□□□ -0.29
CPEB3Q8NE35 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.21□□□□□ -0.29
CPEB3Q8NE35 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CPEB3Q8NE35 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CPEB3Q8NE35 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
CPEB3Q8NE35 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CPEB3Q8NE35 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CPEB3Q8NE35 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
CPEB3Q8NE35 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CPEB3Q8NE35 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CPEB3Q8NE35 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.21□□□□□ -0.3
CPEB3Q8NE35 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CPEB3Q8NE35 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.21□□□□□ -0.3
CPEB3Q8NE35 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CPEB3Q8NE35 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.21□□□□□ -0.3
CPEB3Q8NE35 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CPEB3Q8NE35 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CPEB3Q8NE35 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 KRT8P35-201ENST00000483942 1338 ntBASIC13.2□□□□□ -0.3
CPEB3Q8NE35 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 LRRC59-203ENST00000576448 1531 ntBASIC13.2□□□□□ -0.3
CPEB3Q8NE35 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 AC012441.1-201ENST00000446669 685 ntBASIC13.2□□□□□ -0.3
CPEB3Q8NE35 GAPDHP21-201ENST00000450301 1010 ntBASIC13.2□□□□□ -0.3
CPEB3Q8NE35 AC007389.4-201ENST00000454674 793 ntBASIC13.2□□□□□ -0.3
CPEB3Q8NE35 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 AC068587.3-201ENST00000526613 355 ntBASIC13.2□□□□□ -0.3
CPEB3Q8NE35 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 IGHV3-72-202ENST00000621503 303 ntBASIC13.2□□□□□ -0.3
CPEB3Q8NE35 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 AC106881.1-201ENST00000605849 3329 ntBASIC13.2□□□□□ -0.3
CPEB3Q8NE35 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CPEB3Q8NE35 AC055811.4-201ENST00000624039 1754 ntBASIC13.2□□□□□ -0.3
CPEB3Q8NE35 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CPEB3Q8NE35 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms