Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 FGD5P1-202ENST00000614866 2498 ntBASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 BEND3P1-201ENST00000421591 1944 ntBASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 AL137783.1-201ENST00000623494 1896 ntBASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 AL161772.1-201ENST00000610494 4412 ntBASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 CU634019.7-201ENST00000624153 1185 ntBASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 FP236241.2-201ENST00000624906 1185 ntBASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 AL033527.5-201ENST00000641382 801 ntBASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIMC1Q8NDZ2 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms