Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 RN7SL530P-201ENST00000485097 298 ntBASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 AL132994.1-201ENST00000554098 400 ntBASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 AL118516.1-201ENST00000564152 670 ntBASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 LINC00431-202ENST00000636375 159 ntBASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
COL27A1Q8IZC6 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
COL27A1Q8IZC6 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
COL27A1Q8IZC6 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.71□□□□□ -0.21
COL27A1Q8IZC6 AC091951.1-201ENST00000512854 2465 ntBASIC13.71□□□□□ -0.21
COL27A1Q8IZC6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
COL27A1Q8IZC6 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.71□□□□□ -0.21
COL27A1Q8IZC6 AC011270.2-201ENST00000624293 2550 ntBASIC13.71□□□□□ -0.21
COL27A1Q8IZC6 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
COL27A1Q8IZC6 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
COL27A1Q8IZC6 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.71□□□□□ -0.21
COL27A1Q8IZC6 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.71□□□□□ -0.21
COL27A1Q8IZC6 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL27A1Q8IZC6 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL27A1Q8IZC6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL27A1Q8IZC6 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.71□□□□□ -0.21
COL27A1Q8IZC6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL27A1Q8IZC6 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC13.71□□□□□ -0.21
COL27A1Q8IZC6 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC13.71□□□□□ -0.21
COL27A1Q8IZC6 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC13.71□□□□□ -0.21
COL27A1Q8IZC6 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC13.71□□□□□ -0.21
COL27A1Q8IZC6 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC13.71□□□□□ -0.21
COL27A1Q8IZC6 RPS23-204ENST00000507980 836 ntTSL 2 BASIC13.71□□□□□ -0.21
COL27A1Q8IZC6 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL27A1Q8IZC6 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
COL27A1Q8IZC6 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL27A1Q8IZC6 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC13.71□□□□□ -0.21
COL27A1Q8IZC6 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC13.71□□□□□ -0.21
COL27A1Q8IZC6 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC13.71□□□□□ -0.21
COL27A1Q8IZC6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
COL27A1Q8IZC6 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.71□□□□□ -0.22
COL27A1Q8IZC6 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.71□□□□□ -0.22
COL27A1Q8IZC6 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.71□□□□□ -0.22
COL27A1Q8IZC6 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.22
COL27A1Q8IZC6 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
COL27A1Q8IZC6 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
COL27A1Q8IZC6 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
COL27A1Q8IZC6 AC015688.4-201ENST00000580780 1647 ntBASIC13.71□□□□□ -0.22
COL27A1Q8IZC6 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
COL27A1Q8IZC6 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
COL27A1Q8IZC6 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
COL27A1Q8IZC6 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
COL27A1Q8IZC6 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 RPL18AP8-201ENST00000486071 528 ntBASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 PPIA-208ENST00000489459 907 ntTSL 2 BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 HERC2P11-201ENST00000562845 725 ntBASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 AC100756.2-201ENST00000569537 736 ntBASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 NT5C-204ENST00000578337 582 ntTSL 2 BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 SIGLEC22P-201ENST00000599104 714 ntBASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 AP000322.3-201ENST00000608665 388 ntBASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 PPIA-210ENST00000620047 827 ntTSL 5 BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 HELLS-212ENST00000630929 400 ntTSL 5 BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms