Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 AC004945.1-201ENST00000416738 983 ntBASIC15.31■□□□□ 0.04
CHPFQ8IZ52 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 CHMP1AP1-201ENST00000445563 662 ntBASIC15.31■□□□□ 0.04
CHPFQ8IZ52 EIF4HP1-201ENST00000453115 687 ntBASIC15.31■□□□□ 0.04
CHPFQ8IZ52 AC021723.1-201ENST00000486306 515 ntBASIC15.31■□□□□ 0.04
CHPFQ8IZ52 HIST2H2BC-201ENST00000498492 580 ntBASIC15.31■□□□□ 0.04
CHPFQ8IZ52 MESTP3-201ENST00000503460 968 ntBASIC15.31■□□□□ 0.04
CHPFQ8IZ52 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 AL021578.1-201ENST00000613646 709 ntBASIC15.31■□□□□ 0.04
CHPFQ8IZ52 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 FKBP4P6-201ENST00000457486 1332 ntBASIC15.31■□□□□ 0.04
CHPFQ8IZ52 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 AC099063.4-201ENST00000641099 1602 ntBASIC15.31■□□□□ 0.04
CHPFQ8IZ52 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 AC100850.1-201ENST00000506768 649 ntBASIC15.3■□□□□ 0.04
CHPFQ8IZ52 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 NDUFV2P1-201ENST00000596415 907 ntBASIC15.3■□□□□ 0.04
CHPFQ8IZ52 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 AL359258.3-201ENST00000622910 2331 ntBASIC15.3■□□□□ 0.04
CHPFQ8IZ52 AL137783.1-201ENST00000623494 1896 ntBASIC15.3■□□□□ 0.04
CHPFQ8IZ52 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.3■□□□□ 0.04
CHPFQ8IZ52 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHPFQ8IZ52 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms