Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC103810.10-201ENST00000606504 343 ntBASIC16.22■□□□□ 0.19
HERC6Q8IVU3 AP001065.2-201ENST00000617205 644 ntBASIC16.22■□□□□ 0.19
HERC6Q8IVU3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
HERC6Q8IVU3 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.22■□□□□ 0.19
HERC6Q8IVU3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HERC6Q8IVU3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HERC6Q8IVU3 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.22■□□□□ 0.19
HERC6Q8IVU3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
HERC6Q8IVU3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HERC6Q8IVU3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
HERC6Q8IVU3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HERC6Q8IVU3 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HERC6Q8IVU3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HERC6Q8IVU3 AC023824.1-201ENST00000562945 2975 ntBASIC16.21■□□□□ 0.19
HERC6Q8IVU3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HERC6Q8IVU3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
HERC6Q8IVU3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
HERC6Q8IVU3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
HERC6Q8IVU3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HERC6Q8IVU3 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.21■□□□□ 0.19
HERC6Q8IVU3 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.21■□□□□ 0.19
HERC6Q8IVU3 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.21■□□□□ 0.19
HERC6Q8IVU3 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HERC6Q8IVU3 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HERC6Q8IVU3 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.21■□□□□ 0.19
HERC6Q8IVU3 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
HERC6Q8IVU3 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
HERC6Q8IVU3 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.21■□□□□ 0.19
HERC6Q8IVU3 AC132192.2-201ENST00000596206 1147 ntBASIC16.21■□□□□ 0.19
HERC6Q8IVU3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HERC6Q8IVU3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HERC6Q8IVU3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HERC6Q8IVU3 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HERC6Q8IVU3 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
HERC6Q8IVU3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HERC6Q8IVU3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.21■□□□□ 0.19
HERC6Q8IVU3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
HERC6Q8IVU3 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HERC6Q8IVU3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.21■□□□□ 0.19
HERC6Q8IVU3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
HERC6Q8IVU3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HERC6Q8IVU3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
HERC6Q8IVU3 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HERC6Q8IVU3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
HERC6Q8IVU3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
HERC6Q8IVU3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HERC6Q8IVU3 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.2■□□□□ 0.18
HERC6Q8IVU3 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 AC009093.2-202ENST00000620513 2079 ntBASIC16.2■□□□□ 0.18
HERC6Q8IVU3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 AC127383.1-201ENST00000444697 1800 ntBASIC16.2■□□□□ 0.18
HERC6Q8IVU3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 AC012441.2-201ENST00000444843 739 ntBASIC16.2■□□□□ 0.18
HERC6Q8IVU3 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 AC009084.3-201ENST00000623356 437 ntBASIC16.2■□□□□ 0.18
HERC6Q8IVU3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 INE2-201ENST00000630399 1874 ntBASIC16.2■□□□□ 0.18
HERC6Q8IVU3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms