Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 AP001267.2-201ENST00000532619 2086 ntBASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 INTS4P2-202ENST00000614726 2019 ntBASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 MEP1AP4-201ENST00000423244 1087 ntBASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 RPL13AP25-201ENST00000484130 612 ntBASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 AC023090.2-201ENST00000625182 2110 ntBASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 BX640514.1-201ENST00000583223 1918 ntBASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LINC00346Q8IVM7 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 AC134915.1-201ENST00000426461 574 ntBASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms