Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 AC013553.1-201ENST00000560906 267 ntBASIC10.19□□□□□ -0.78
CSMD3Q7Z407 USB1-205ENST00000561743 1135 ntTSL 3 BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 AC067931.2-201ENST00000623655 2003 ntBASIC10.19□□□□□ -0.78
CSMD3Q7Z407 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 AC106827.1-201ENST00000366454 431 ntBASIC10.18□□□□□ -0.78
CSMD3Q7Z407 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 KRT8P28-201ENST00000433288 1390 ntBASIC10.18□□□□□ -0.78
CSMD3Q7Z407 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 BAK1P1-201ENST00000317045 636 ntBASIC10.18□□□□□ -0.78
CSMD3Q7Z407 SURF4-203ENST00000371991 715 ntTSL 3 BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 HNRNPA1P58-201ENST00000403629 610 ntBASIC10.18□□□□□ -0.78
CSMD3Q7Z407 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 HNRNPA1P27-201ENST00000412087 955 ntBASIC10.18□□□□□ -0.78
CSMD3Q7Z407 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 CICP12-201ENST00000455801 843 ntBASIC10.18□□□□□ -0.78
CSMD3Q7Z407 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 AC063952.3-201ENST00000467756 308 ntBASIC10.18□□□□□ -0.78
CSMD3Q7Z407 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 FAM90A21P-201ENST00000510875 1396 ntBASIC10.18□□□□□ -0.78
CSMD3Q7Z407 FAM90A15P-201ENST00000514465 1395 ntBASIC10.18□□□□□ -0.78
CSMD3Q7Z407 FAM90A6P-201ENST00000515148 1394 ntBASIC10.18□□□□□ -0.78
CSMD3Q7Z407 FAM90A16P-201ENST00000526662 1395 ntBASIC10.18□□□□□ -0.78
CSMD3Q7Z407 FAM90A9P-201ENST00000527940 1395 ntBASIC10.18□□□□□ -0.78
CSMD3Q7Z407 FAM90A5P-201ENST00000528738 1395 ntBASIC10.18□□□□□ -0.78
CSMD3Q7Z407 FAM90A14P-201ENST00000530386 1395 ntBASIC10.18□□□□□ -0.78
CSMD3Q7Z407 FAM90A13P-201ENST00000534703 1395 ntBASIC10.18□□□□□ -0.78
CSMD3Q7Z407 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CSMD3Q7Z407 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 STRN-202ENST00000379213 2254 ntTSL 5 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 CHCHD2P2-201ENST00000503744 321 ntBASIC10.17□□□□□ -0.78
CSMD3Q7Z407 GDNF-207ENST00000515058 764 ntTSL 5 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 ZBED1P1-201ENST00000502364 1930 ntBASIC10.17□□□□□ -0.78
CSMD3Q7Z407 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms