Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RNF44Q7L0R7 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RNF44Q7L0R7 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RNF44Q7L0R7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RNF44Q7L0R7 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF44Q7L0R7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RNF44Q7L0R7 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
RNF44Q7L0R7 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RNF44Q7L0R7 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF44Q7L0R7 TPM3P8-201ENST00000330554 643 ntBASIC14.45□□□□□ -0.1
RNF44Q7L0R7 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF44Q7L0R7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF44Q7L0R7 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RNF44Q7L0R7 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF44Q7L0R7 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.45□□□□□ -0.1
RNF44Q7L0R7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.45□□□□□ -0.1
RNF44Q7L0R7 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RNF44Q7L0R7 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF44Q7L0R7 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.45□□□□□ -0.1
RNF44Q7L0R7 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RNF44Q7L0R7 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.45□□□□□ -0.1
RNF44Q7L0R7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RNF44Q7L0R7 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF44Q7L0R7 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF44Q7L0R7 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RNF44Q7L0R7 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF44Q7L0R7 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.45□□□□□ -0.1
RNF44Q7L0R7 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
RNF44Q7L0R7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF44Q7L0R7 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF44Q7L0R7 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF44Q7L0R7 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF44Q7L0R7 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 AC004466.1-201ENST00000599515 1080 ntBASIC14.44□□□□□ -0.1
RNF44Q7L0R7 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RNF44Q7L0R7 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 ACE3P-201ENST00000423435 1973 ntBASIC14.43□□□□□ -0.1
RNF44Q7L0R7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF44Q7L0R7 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms