Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 AC026954.1-201ENST00000429771 1293 ntBASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 RPS2P32-201ENST00000439199 892 ntBASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 AC015656.1-201ENST00000624209 3578 ntBASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFWD3Q6PCD5 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 AL360270.3-201ENST00000609118 1348 ntBASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 AGAP7P-201ENST00000582299 2062 ntBASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 AGAP14-201ENST00000624701 2060 ntBASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 CNN2P8-201ENST00000421872 913 ntBASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 HLA-V-201ENST00000429037 534 ntBASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 CSF2RBP1-201ENST00000447905 391 ntBASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 AC078819.1-201ENST00000547454 765 ntBASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 AC012085.1-201ENST00000548270 765 ntBASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 ECM1P1-201ENST00000604092 1279 ntBASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms