Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.62□□□□□ -0.23
RTL6Q6ICC9 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
RTL6Q6ICC9 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.62□□□□□ -0.23
RTL6Q6ICC9 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTL6Q6ICC9 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.62□□□□□ -0.23
RTL6Q6ICC9 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.62□□□□□ -0.23
RTL6Q6ICC9 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTL6Q6ICC9 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTL6Q6ICC9 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.62□□□□□ -0.23
RTL6Q6ICC9 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RTL6Q6ICC9 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.62□□□□□ -0.23
RTL6Q6ICC9 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 AC009090.5-201ENST00000624886 2285 ntBASIC13.61□□□□□ -0.23
RTL6Q6ICC9 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.61□□□□□ -0.23
RTL6Q6ICC9 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 AL354989.2-201ENST00000435838 1540 ntBASIC13.61□□□□□ -0.23
RTL6Q6ICC9 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 AC090616.6-203ENST00000579186 1945 ntBASIC13.61□□□□□ -0.23
RTL6Q6ICC9 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 BCYRN1-201ENST00000418539 200 ntBASIC13.61□□□□□ -0.23
RTL6Q6ICC9 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 EIF3FP3-201ENST00000434851 1086 ntBASIC13.61□□□□□ -0.23
RTL6Q6ICC9 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 AC104306.2-201ENST00000451877 341 ntBASIC13.61□□□□□ -0.23
RTL6Q6ICC9 RPSAP36-202ENST00000494591 1261 ntBASIC13.61□□□□□ -0.23
RTL6Q6ICC9 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 SAMD11P1-201ENST00000571429 661 ntBASIC13.61□□□□□ -0.23
RTL6Q6ICC9 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 CICP13-201ENST00000422015 2789 ntBASIC13.61□□□□□ -0.23
RTL6Q6ICC9 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
RTL6Q6ICC9 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTL6Q6ICC9 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTL6Q6ICC9 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
RTL6Q6ICC9 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTL6Q6ICC9 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTL6Q6ICC9 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
RTL6Q6ICC9 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTL6Q6ICC9 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RTL6Q6ICC9 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.6□□□□□ -0.23
RTL6Q6ICC9 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTL6Q6ICC9 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTL6Q6ICC9 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTL6Q6ICC9 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.6□□□□□ -0.23
RTL6Q6ICC9 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTL6Q6ICC9 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.6□□□□□ -0.23
RTL6Q6ICC9 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTL6Q6ICC9 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.6□□□□□ -0.23
RTL6Q6ICC9 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RTL6Q6ICC9 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTL6Q6ICC9 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTL6Q6ICC9 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTL6Q6ICC9 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RTL6Q6ICC9 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTL6Q6ICC9 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTL6Q6ICC9 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RTL6Q6ICC9 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RTL6Q6ICC9 CNN2P10-201ENST00000443067 918 ntBASIC13.6□□□□□ -0.23
RTL6Q6ICC9 KRT8P13-201ENST00000463294 1010 ntBASIC13.6□□□□□ -0.23
RTL6Q6ICC9 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms