Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC12.77□□□□□ -0.36
LRRK2Q5S007 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LRRK2Q5S007 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LRRK2Q5S007 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
LRRK2Q5S007 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LRRK2Q5S007 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LRRK2Q5S007 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LRRK2Q5S007 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC12.77□□□□□ -0.36
LRRK2Q5S007 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
LRRK2Q5S007 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LRRK2Q5S007 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.77□□□□□ -0.36
LRRK2Q5S007 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LRRK2Q5S007 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
LRRK2Q5S007 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRK2Q5S007 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRK2Q5S007 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LRRK2Q5S007 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRK2Q5S007 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRK2Q5S007 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC12.77□□□□□ -0.37
LRRK2Q5S007 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC12.77□□□□□ -0.37
LRRK2Q5S007 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC12.77□□□□□ -0.37
LRRK2Q5S007 ALG1L3P-201ENST00000503331 765 ntBASIC12.77□□□□□ -0.37
LRRK2Q5S007 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC12.77□□□□□ -0.37
LRRK2Q5S007 AC003686.1-201ENST00000550956 1034 ntBASIC12.77□□□□□ -0.37
LRRK2Q5S007 AC120498.5-201ENST00000561757 299 ntBASIC12.77□□□□□ -0.37
LRRK2Q5S007 AC004466.2-201ENST00000614749 516 ntBASIC12.77□□□□□ -0.37
LRRK2Q5S007 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
LRRK2Q5S007 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRK2Q5S007 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LRRK2Q5S007 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRK2Q5S007 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRK2Q5S007 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRK2Q5S007 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRK2Q5S007 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.77□□□□□ -0.37
LRRK2Q5S007 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRK2Q5S007 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRK2Q5S007 FLJ38576-201ENST00000623820 2459 ntBASIC12.77□□□□□ -0.37
LRRK2Q5S007 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRK2Q5S007 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRK2Q5S007 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
LRRK2Q5S007 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.77□□□□□ -0.37
LRRK2Q5S007 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRK2Q5S007 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC12.77□□□□□ -0.37
LRRK2Q5S007 AL512599.1-201ENST00000430724 685 ntBASIC12.77□□□□□ -0.37
LRRK2Q5S007 AC018638.5-201ENST00000450885 754 ntBASIC12.77□□□□□ -0.37
LRRK2Q5S007 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRK2Q5S007 PFN2-212ENST00000490975 858 ntTSL 4 BASIC12.77□□□□□ -0.37
LRRK2Q5S007 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC12.77□□□□□ -0.37
LRRK2Q5S007 HNRNPA1P16-201ENST00000575692 955 ntBASIC12.77□□□□□ -0.37
LRRK2Q5S007 AL512324.3-201ENST00000619383 882 ntBASIC12.77□□□□□ -0.37
LRRK2Q5S007 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC12.76□□□□□ -0.37
LRRK2Q5S007 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.76□□□□□ -0.37
LRRK2Q5S007 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC12.76□□□□□ -0.37
LRRK2Q5S007 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.76□□□□□ -0.37
LRRK2Q5S007 AC092570.1-201ENST00000414446 469 ntBASIC12.76□□□□□ -0.37
LRRK2Q5S007 SOD2-205ENST00000444946 917 ntTSL 2 BASIC12.76□□□□□ -0.37
LRRK2Q5S007 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.76□□□□□ -0.37
LRRK2Q5S007 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC12.76□□□□□ -0.37
LRRK2Q5S007 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC12.76□□□□□ -0.37
LRRK2Q5S007 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.76□□□□□ -0.37
LRRK2Q5S007 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.76□□□□□ -0.37
LRRK2Q5S007 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.76□□□□□ -0.37
LRRK2Q5S007 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LRRK2Q5S007 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
LRRK2Q5S007 OR10N1P-201ENST00000392758 869 ntBASIC12.76□□□□□ -0.37
LRRK2Q5S007 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 GUSBP10-201ENST00000417412 665 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms