Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBWD3Q5JTY5 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
CBWD3Q5JTY5 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBWD3Q5JTY5 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBWD3Q5JTY5 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.22■□□□□ 0.19
CBWD3Q5JTY5 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.22■□□□□ 0.19
CBWD3Q5JTY5 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.22■□□□□ 0.19
CBWD3Q5JTY5 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBWD3Q5JTY5 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
CBWD3Q5JTY5 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.22■□□□□ 0.19
CBWD3Q5JTY5 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CBWD3Q5JTY5 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBWD3Q5JTY5 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 AC011840.2-201ENST00000563063 1520 ntBASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 AC020910.5-201ENST00000623668 1865 ntBASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 TTTY23B-201ENST00000442790 549 ntBASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 BCRP2-202ENST00000447763 634 ntBASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 BCRP6-201ENST00000510112 632 ntBASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 BCRP7-201ENST00000511549 544 ntBASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.21■□□□□ 0.19
CBWD3Q5JTY5 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.18
CBWD3Q5JTY5 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CBWD3Q5JTY5 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CBWD3Q5JTY5 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CBWD3Q5JTY5 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.21■□□□□ 0.18
CBWD3Q5JTY5 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CBWD3Q5JTY5 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 CU639417.3-201ENST00000624240 1404 ntBASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 AC005229.1-201ENST00000392885 409 ntBASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 NME2P1-201ENST00000426182 414 ntBASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 MESTP3-201ENST00000503460 968 ntBASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 AC025279.2-201ENST00000569730 653 ntBASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 RN7SL48P-201ENST00000579283 293 ntBASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 AC015936.2-201ENST00000593177 259 ntBASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 AC105233.6-201ENST00000642093 218 ntBASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.2■□□□□ 0.18
CBWD3Q5JTY5 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms