Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC144BQ3MJ40 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC144BQ3MJ40 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC144BQ3MJ40 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC144BQ3MJ40 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC144BQ3MJ40 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC144BQ3MJ40 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 ZBED1P1-201ENST00000502364 1930 ntBASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 MIR1202-201ENST00000408529 83 ntBASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 AC104306.2-201ENST00000451877 341 ntBASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 RNA5SP486-201ENST00000515961 83 ntBASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CCDC144BQ3MJ40 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 LINC01230-201ENST00000625222 3017 ntBASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 AC007969.1-201ENST00000433675 447 ntBASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 AP001258.2-201ENST00000529891 490 ntBASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC144BQ3MJ40 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCDC144BQ3MJ40 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCDC144BQ3MJ40 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC144BQ3MJ40 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCDC144BQ3MJ40 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC144BQ3MJ40 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
CCDC144BQ3MJ40 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC144BQ3MJ40 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms