Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LTBQ06643 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
LTBQ06643 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LTBQ06643 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LTBQ06643 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.79□□□□□ -0.2
LTBQ06643 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.79□□□□□ -0.2
LTBQ06643 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.79□□□□□ -0.2
LTBQ06643 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LTBQ06643 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LTBQ06643 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.79□□□□□ -0.2
LTBQ06643 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LTBQ06643 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LTBQ06643 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
LTBQ06643 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LTBQ06643 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.79□□□□□ -0.2
LTBQ06643 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LTBQ06643 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.79□□□□□ -0.2
LTBQ06643 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.79□□□□□ -0.2
LTBQ06643 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.79□□□□□ -0.2
LTBQ06643 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.79□□□□□ -0.2
LTBQ06643 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.79□□□□□ -0.2
LTBQ06643 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.79□□□□□ -0.2
LTBQ06643 BRI3BPP1-201ENST00000594224 787 ntBASIC13.79□□□□□ -0.2
LTBQ06643 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LTBQ06643 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
LTBQ06643 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
LTBQ06643 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LTBQ06643 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LTBQ06643 SLC7A15P-201ENST00000424028 1363 ntBASIC13.79□□□□□ -0.2
LTBQ06643 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LTBQ06643 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LTBQ06643 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LTBQ06643 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LTBQ06643 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.79□□□□□ -0.2
LTBQ06643 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LTBQ06643 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LTBQ06643 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LTBQ06643 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.79□□□□□ -0.2
LTBQ06643 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LTBQ06643 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.79□□□□□ -0.2
LTBQ06643 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LTBQ06643 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.79□□□□□ -0.2
LTBQ06643 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LTBQ06643 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LTBQ06643 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.78□□□□□ -0.2
LTBQ06643 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.78□□□□□ -0.2
LTBQ06643 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTBQ06643 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTBQ06643 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTBQ06643 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LTBQ06643 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTBQ06643 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
LTBQ06643 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.78□□□□□ -0.2
LTBQ06643 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTBQ06643 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTBQ06643 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LTBQ06643 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTBQ06643 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LTBQ06643 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.78□□□□□ -0.2
LTBQ06643 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LTBQ06643 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTBQ06643 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTBQ06643 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.78□□□□□ -0.2
LTBQ06643 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.78□□□□□ -0.2
LTBQ06643 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC13.78□□□□□ -0.2
LTBQ06643 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.78□□□□□ -0.2
LTBQ06643 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.78□□□□□ -0.2
LTBQ06643 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.78□□□□□ -0.2
LTBQ06643 RRP7BP-205ENST00000566851 833 ntBASIC13.78□□□□□ -0.2
LTBQ06643 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.78□□□□□ -0.2
LTBQ06643 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.78□□□□□ -0.2
LTBQ06643 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.78□□□□□ -0.2
LTBQ06643 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.78□□□□□ -0.2
LTBQ06643 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.78□□□□□ -0.2
LTBQ06643 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTBQ06643 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTBQ06643 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LTBQ06643 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LTBQ06643 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTBQ06643 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.78□□□□□ -0.2
LTBQ06643 AC018529.2-202ENST00000611482 3087 ntBASIC13.78□□□□□ -0.2
LTBQ06643 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTBQ06643 AL158070.2-201ENST00000623713 1621 ntBASIC13.78□□□□□ -0.2
LTBQ06643 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTBQ06643 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.78□□□□□ -0.2
LTBQ06643 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTBQ06643 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.78□□□□□ -0.2
LTBQ06643 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTBQ06643 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTBQ06643 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LTBQ06643 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LTBQ06643 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LTBQ06643 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LTBQ06643 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.78□□□□□ -0.2
LTBQ06643 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTBQ06643 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTBQ06643 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTBQ06643 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.78□□□□□ -0.2
LTBQ06643 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTBQ06643 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms