Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 CLK3P2-201ENST00000427566 1453 ntBASIC13.59□□□□□ -0.23
CDK5Q00535 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.59□□□□□ -0.23
CDK5Q00535 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.59□□□□□ -0.23
CDK5Q00535 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
CDK5Q00535 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.59□□□□□ -0.23
CDK5Q00535 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CDK5Q00535 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CDK5Q00535 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
CDK5Q00535 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDK5Q00535 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDK5Q00535 TCAM1P-207ENST00000485295 1537 ntBASIC13.59□□□□□ -0.23
CDK5Q00535 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDK5Q00535 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.59□□□□□ -0.23
CDK5Q00535 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.59□□□□□ -0.23
CDK5Q00535 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDK5Q00535 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDK5Q00535 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CDK5Q00535 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDK5Q00535 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDK5Q00535 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDK5Q00535 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDK5Q00535 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDK5Q00535 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDK5Q00535 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDK5Q00535 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDK5Q00535 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.58□□□□□ -0.24
CDK5Q00535 AC026410.3-201ENST00000514280 936 ntBASIC13.58□□□□□ -0.24
CDK5Q00535 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDK5Q00535 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.58□□□□□ -0.24
CDK5Q00535 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.58□□□□□ -0.24
CDK5Q00535 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.58□□□□□ -0.24
CDK5Q00535 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.58□□□□□ -0.24
CDK5Q00535 AC010327.4-202ENST00000591484 748 ntBASIC13.58□□□□□ -0.24
CDK5Q00535 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CDK5Q00535 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.58□□□□□ -0.24
CDK5Q00535 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.58□□□□□ -0.24
CDK5Q00535 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDK5Q00535 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CDK5Q00535 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDK5Q00535 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDK5Q00535 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDK5Q00535 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDK5Q00535 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDK5Q00535 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDK5Q00535 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDK5Q00535 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDK5Q00535 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDK5Q00535 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDK5Q00535 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.58□□□□□ -0.24
CDK5Q00535 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
CDK5Q00535 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDK5Q00535 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDK5Q00535 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDK5Q00535 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDK5Q00535 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDK5Q00535 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.58□□□□□ -0.24
CDK5Q00535 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CDK5Q00535 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.58□□□□□ -0.24
CDK5Q00535 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDK5Q00535 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.58□□□□□ -0.24
CDK5Q00535 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDK5Q00535 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDK5Q00535 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDK5Q00535 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDK5Q00535 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.57□□□□□ -0.24
CDK5Q00535 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDK5Q00535 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDK5Q00535 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDK5Q00535 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CDK5Q00535 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDK5Q00535 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
CDK5Q00535 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CDK5Q00535 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.57□□□□□ -0.24
CDK5Q00535 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDK5Q00535 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CDK5Q00535 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDK5Q00535 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDK5Q00535 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CDK5Q00535 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDK5Q00535 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDK5Q00535 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDK5Q00535 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDK5Q00535 AC211486.1-202ENST00000416371 468 ntBASIC13.57□□□□□ -0.24
CDK5Q00535 UPF3AP3-201ENST00000420996 769 ntBASIC13.57□□□□□ -0.24
CDK5Q00535 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.57□□□□□ -0.24
CDK5Q00535 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.57□□□□□ -0.24
CDK5Q00535 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
CDK5Q00535 AC211476.1-201ENST00000503899 468 ntBASIC13.57□□□□□ -0.24
CDK5Q00535 AC109322.1-201ENST00000524499 1264 ntBASIC13.57□□□□□ -0.24
CDK5Q00535 AC027369.6-201ENST00000525520 931 ntBASIC13.57□□□□□ -0.24
CDK5Q00535 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.57□□□□□ -0.24
CDK5Q00535 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.57□□□□□ -0.24
CDK5Q00535 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.57□□□□□ -0.24
CDK5Q00535 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.57□□□□□ -0.24
CDK5Q00535 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.57□□□□□ -0.24
CDK5Q00535 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.57□□□□□ -0.24
CDK5Q00535 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.57□□□□□ -0.24
CDK5Q00535 AL596442.2-201ENST00000610240 980 ntBASIC13.57□□□□□ -0.24
CDK5Q00535 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CDK5Q00535 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms