Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX3P78415 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX3P78415 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX3P78415 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX3P78415 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX3P78415 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.56■□□□□ 0.4
IRX3P78415 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
IRX3P78415 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX3P78415 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX3P78415 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX3P78415 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.56■□□□□ 0.4
IRX3P78415 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX3P78415 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX3P78415 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.56■□□□□ 0.4
IRX3P78415 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
IRX3P78415 Z97180.1-201ENST00000445173 988 ntBASIC17.56■□□□□ 0.4
IRX3P78415 RN7SL11P-201ENST00000471305 293 ntBASIC17.56■□□□□ 0.4
IRX3P78415 IMP3P2-201ENST00000489760 475 ntBASIC17.56■□□□□ 0.4
IRX3P78415 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
IRX3P78415 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.56■□□□□ 0.4
IRX3P78415 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
IRX3P78415 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
IRX3P78415 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.56■□□□□ 0.4
IRX3P78415 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.56■□□□□ 0.4
IRX3P78415 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.56■□□□□ 0.4
IRX3P78415 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX3P78415 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX3P78415 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX3P78415 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX3P78415 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
IRX3P78415 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX3P78415 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
IRX3P78415 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
IRX3P78415 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX3P78415 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
IRX3P78415 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX3P78415 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
IRX3P78415 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX3P78415 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IRX3P78415 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IRX3P78415 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IRX3P78415 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.55■□□□□ 0.4
IRX3P78415 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IRX3P78415 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IRX3P78415 KRT8P29-201ENST00000420409 1371 ntBASIC17.55■□□□□ 0.4
IRX3P78415 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IRX3P78415 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
IRX3P78415 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
IRX3P78415 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
IRX3P78415 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.55■□□□□ 0.4
IRX3P78415 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.55■□□□□ 0.4
IRX3P78415 CLUHP2-201ENST00000426660 1303 ntBASIC17.55■□□□□ 0.4
IRX3P78415 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IRX3P78415 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
IRX3P78415 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IRX3P78415 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.55■□□□□ 0.4
IRX3P78415 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
IRX3P78415 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IRX3P78415 RPL5P21-201ENST00000404620 815 ntBASIC17.55■□□□□ 0.4
IRX3P78415 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.55■□□□□ 0.4
IRX3P78415 RN7SL720P-201ENST00000488178 304 ntBASIC17.55■□□□□ 0.4
IRX3P78415 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.55■□□□□ 0.4
IRX3P78415 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.55■□□□□ 0.4
IRX3P78415 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.55■□□□□ 0.4
IRX3P78415 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.55■□□□□ 0.4
IRX3P78415 AC097724.1-201ENST00000609581 426 ntBASIC17.55■□□□□ 0.4
IRX3P78415 AL023803.2-201ENST00000620080 638 ntBASIC17.55■□□□□ 0.4
IRX3P78415 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.55■□□□□ 0.4
IRX3P78415 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
IRX3P78415 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
IRX3P78415 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
IRX3P78415 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.55■□□□□ 0.4
IRX3P78415 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IRX3P78415 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
IRX3P78415 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
IRX3P78415 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IRX3P78415 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.55■□□□□ 0.4
IRX3P78415 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.55■□□□□ 0.4
IRX3P78415 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IRX3P78415 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
IRX3P78415 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
IRX3P78415 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX3P78415 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX3P78415 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX3P78415 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX3P78415 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.54■□□□□ 0.4
IRX3P78415 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX3P78415 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
IRX3P78415 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.54■□□□□ 0.4
IRX3P78415 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
IRX3P78415 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX3P78415 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX3P78415 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX3P78415 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.54■□□□□ 0.4
IRX3P78415 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX3P78415 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX3P78415 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX3P78415 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
IRX3P78415 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
IRX3P78415 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms