Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCNA1P78396 RN7SL67P-201ENST00000492147 296 ntBASIC16.96■□□□□ 0.31
CCNA1P78396 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC16.96■□□□□ 0.31
CCNA1P78396 GCOM2-201ENST00000509133 1104 ntBASIC16.96■□□□□ 0.31
CCNA1P78396 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.96■□□□□ 0.31
CCNA1P78396 AC026803.1-201ENST00000569130 274 ntBASIC16.96■□□□□ 0.31
CCNA1P78396 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.96■□□□□ 0.31
CCNA1P78396 RN7SL736P-201ENST00000613111 269 ntBASIC16.96■□□□□ 0.31
CCNA1P78396 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.96■□□□□ 0.31
CCNA1P78396 MIR6769A-201ENST00000617340 73 ntBASIC16.96■□□□□ 0.31
CCNA1P78396 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.96■□□□□ 0.31
CCNA1P78396 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.96■□□□□ 0.31
CCNA1P78396 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.96■□□□□ 0.31
CCNA1P78396 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCNA1P78396 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCNA1P78396 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.96■□□□□ 0.31
CCNA1P78396 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCNA1P78396 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
CCNA1P78396 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CCNA1P78396 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCNA1P78396 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCNA1P78396 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCNA1P78396 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CCNA1P78396 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCNA1P78396 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.96■□□□□ 0.3
CCNA1P78396 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCNA1P78396 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.3
CCNA1P78396 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CCNA1P78396 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCNA1P78396 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCNA1P78396 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCNA1P78396 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.95■□□□□ 0.3
CCNA1P78396 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCNA1P78396 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCNA1P78396 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCNA1P78396 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCNA1P78396 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCNA1P78396 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCNA1P78396 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CCNA1P78396 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCNA1P78396 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCNA1P78396 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCNA1P78396 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CCNA1P78396 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCNA1P78396 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCNA1P78396 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CCNA1P78396 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCNA1P78396 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCNA1P78396 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCNA1P78396 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCNA1P78396 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CCNA1P78396 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.95■□□□□ 0.3
CCNA1P78396 NPM1P43-201ENST00000558669 786 ntBASIC16.95■□□□□ 0.3
CCNA1P78396 AL031713.1-201ENST00000564813 661 ntBASIC16.95■□□□□ 0.3
CCNA1P78396 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CCNA1P78396 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.95■□□□□ 0.3
CCNA1P78396 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.95■□□□□ 0.3
CCNA1P78396 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCNA1P78396 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCNA1P78396 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.95■□□□□ 0.3
CCNA1P78396 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCNA1P78396 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.95■□□□□ 0.3
CCNA1P78396 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCNA1P78396 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCNA1P78396 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
CCNA1P78396 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCNA1P78396 AC074138.1-201ENST00000611182 1303 ntBASIC16.95■□□□□ 0.3
CCNA1P78396 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCNA1P78396 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCNA1P78396 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCNA1P78396 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.94■□□□□ 0.3
CCNA1P78396 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCNA1P78396 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCNA1P78396 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CCNA1P78396 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CCNA1P78396 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.94■□□□□ 0.3
CCNA1P78396 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCNA1P78396 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCNA1P78396 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.94■□□□□ 0.3
CCNA1P78396 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.94■□□□□ 0.3
CCNA1P78396 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCNA1P78396 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.94■□□□□ 0.3
CCNA1P78396 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCNA1P78396 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCNA1P78396 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC16.94■□□□□ 0.3
CCNA1P78396 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.94■□□□□ 0.3
CCNA1P78396 AL645933.1-201ENST00000440087 609 ntBASIC16.94■□□□□ 0.3
CCNA1P78396 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.94■□□□□ 0.3
CCNA1P78396 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.94■□□□□ 0.3
CCNA1P78396 RN7SL8P-201ENST00000461771 266 ntBASIC16.94■□□□□ 0.3
CCNA1P78396 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCNA1P78396 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCNA1P78396 AC131206.1-201ENST00000538078 1211 ntBASIC16.94■□□□□ 0.3
CCNA1P78396 PGAM1P5-201ENST00000548011 764 ntBASIC16.94■□□□□ 0.3
CCNA1P78396 RBM8B-201ENST00000555532 525 ntBASIC16.94■□□□□ 0.3
CCNA1P78396 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.94■□□□□ 0.3
CCNA1P78396 WDR7-208ENST00000589935 544 ntTSL 4 BASIC16.94■□□□□ 0.3
CCNA1P78396 LINC01783-202ENST00000614408 828 ntBASIC16.94■□□□□ 0.3
CCNA1P78396 BX284668.2-205ENST00000619677 828 ntBASIC16.94■□□□□ 0.3
CCNA1P78396 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms