Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC10.7□□□□□ -0.7
RPL39P62891 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
RPL39P62891 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
RPL39P62891 AC079140.1-201ENST00000508039 487 ntBASIC10.7□□□□□ -0.7
RPL39P62891 SLED1-202ENST00000512051 380 ntBASIC10.7□□□□□ -0.7
RPL39P62891 KRT8P48-201ENST00000515599 1220 ntBASIC10.7□□□□□ -0.7
RPL39P62891 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RPL39P62891 SLC25A39P2-201ENST00000537614 270 ntBASIC10.7□□□□□ -0.7
RPL39P62891 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
RPL39P62891 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC10.7□□□□□ -0.7
RPL39P62891 LINC01225-203ENST00000563550 1244 ntBASIC10.7□□□□□ -0.7
RPL39P62891 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC10.7□□□□□ -0.7
RPL39P62891 AC106730.1-201ENST00000566722 1090 ntBASIC10.7□□□□□ -0.7
RPL39P62891 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC10.7□□□□□ -0.7
RPL39P62891 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC10.7□□□□□ -0.7
RPL39P62891 RN7SL510P-201ENST00000581311 263 ntBASIC10.7□□□□□ -0.7
RPL39P62891 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
RPL39P62891 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RPL39P62891 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
RPL39P62891 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
RPL39P62891 AL359183.1-201ENST00000623796 2132 ntBASIC10.7□□□□□ -0.7
RPL39P62891 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
RPL39P62891 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
RPL39P62891 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC10.7□□□□□ -0.7
RPL39P62891 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
RPL39P62891 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RPL39P62891 AL354702.1-201ENST00000442006 1960 ntBASIC10.7□□□□□ -0.7
RPL39P62891 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC10.7□□□□□ -0.7
RPL39P62891 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
RPL39P62891 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
RPL39P62891 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
RPL39P62891 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
RPL39P62891 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
RPL39P62891 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
RPL39P62891 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC10.7□□□□□ -0.7
RPL39P62891 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RPL39P62891 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC10.69□□□□□ -0.7
RPL39P62891 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
RPL39P62891 TK1-203ENST00000588734 1681 ntTSL 2 BASIC10.69□□□□□ -0.7
RPL39P62891 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC10.69□□□□□ -0.7
RPL39P62891 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RPL39P62891 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
RPL39P62891 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC10.69□□□□□ -0.7
RPL39P62891 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
RPL39P62891 TCAF1P1-201ENST00000414990 2232 ntBASIC10.69□□□□□ -0.7
RPL39P62891 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC10.69□□□□□ -0.7
RPL39P62891 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
RPL39P62891 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RPL39P62891 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
RPL39P62891 PES1-204ENST00000402284 2144 ntTSL 5 BASIC10.69□□□□□ -0.7
RPL39P62891 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RPL39P62891 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RPL39P62891 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RPL39P62891 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC10.69□□□□□ -0.7
RPL39P62891 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RPL39P62891 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC10.69□□□□□ -0.7
RPL39P62891 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RPL39P62891 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RPL39P62891 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RPL39P62891 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RPL39P62891 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RPL39P62891 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RPL39P62891 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC10.69□□□□□ -0.7
RPL39P62891 RBM39-205ENST00000397370 612 ntTSL 2 BASIC10.69□□□□□ -0.7
RPL39P62891 AC104457.1-201ENST00000401024 814 ntBASIC10.69□□□□□ -0.7
RPL39P62891 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RPL39P62891 AL353705.2-201ENST00000428243 662 ntBASIC10.69□□□□□ -0.7
RPL39P62891 FAM58CP-201ENST00000435741 640 ntBASIC10.69□□□□□ -0.7
RPL39P62891 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC10.69□□□□□ -0.7
RPL39P62891 USP40-206ENST00000443711 628 ntTSL 2 BASIC10.69□□□□□ -0.7
RPL39P62891 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC10.69□□□□□ -0.7
RPL39P62891 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC10.69□□□□□ -0.7
RPL39P62891 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC10.69□□□□□ -0.7
RPL39P62891 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC10.69□□□□□ -0.7
RPL39P62891 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC10.69□□□□□ -0.7
RPL39P62891 KRT8P23-201ENST00000560090 1207 ntBASIC10.69□□□□□ -0.7
RPL39P62891 AC145285.3-201ENST00000564603 959 ntBASIC10.69□□□□□ -0.7
RPL39P62891 AC105021.1-202ENST00000570572 669 ntBASIC10.69□□□□□ -0.7
RPL39P62891 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC10.69□□□□□ -0.7
RPL39P62891 AC104692.2-201ENST00000603054 253 ntBASIC10.69□□□□□ -0.7
RPL39P62891 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
RPL39P62891 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC10.69□□□□□ -0.7
RPL39P62891 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC10.69□□□□□ -0.7
RPL39P62891 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
RPL39P62891 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
RPL39P62891 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
RPL39P62891 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RPL39P62891 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC10.69□□□□□ -0.7
RPL39P62891 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RPL39P62891 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RPL39P62891 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC10.69□□□□□ -0.7
RPL39P62891 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RPL39P62891 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RPL39P62891 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC10.69□□□□□ -0.7
RPL39P62891 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RPL39P62891 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC10.69□□□□□ -0.7
RPL39P62891 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RPL39P62891 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC10.69□□□□□ -0.7
RPL39P62891 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
RPL39P62891 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms